RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 A0A1W2PRG6 482 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 SLC35F4A4IF30 521 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 UNC119BA6NIH7 251 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 OR6C65A6NJZ3 312 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 C16orf97H3BN30 126 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 CLOCKO15516 846 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 KLF4O43474 513 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 SLC43A1O75387 559 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 ZNF432O94892 652 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 IFNGR1P15260 489 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 IGFBP2P18065 325 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 PEX19P40855 299 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 PRPS1P60891 318 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 SORDQ00796 357 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 FAPQ12884 760 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 FHL1Q13642 323 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 SNTB1Q13884 538 aaKnown RBP12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 MICAQ29983 383 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 ALG10Q5BKT4 473 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 C1orf94Q6P1W5 598 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 PGBD2Q6P3X8 592 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 STAC2Q6ZMT1 411 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 CXorf67Q86X51 503 aaPredicted RBP12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 LRRC75AQ8NAA5 344 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 POMGNT2Q8NAT1 580 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 OR9Q2Q8NGE9 314 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 OR2M2Q96R28 347 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 ENKD1Q9H0I2 346 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 MCCC2Q9HCC0 563 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 MAST4O15021 2626 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 ICE1Q9Y2F5 2266 aa12.77□□□□□ -0.37
DNMT3A-208ENST00000466601 ZNF726A6NNF4 738 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 HNRNPRO43390 633 aaKnown RBP12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 PTP4A3O75365 173 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 DEAF1O75398 565 aaPredicted RBP12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 E2F6O75461 281 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 KRT33AO76009 404 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 BCL10O95999 233 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 PSMB1P20618 241 aaKnown RBP12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 IGHV1-2P23083 117 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 FPR3P25089 353 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 DNAJA1P31689 397 aaKnown RBP12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 UGT2B10P36537 528 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 GSSP48637 474 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 IST1P53990 364 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 BIDP55957 195 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 CTXN1P60606 82 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 ITGADQ13349 1161 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 MELKQ14680 651 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 P2RY6Q15077 328 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 SFRP5Q5T4F7 317 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 CARD17Q5XLA6 110 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 ZNF770Q6IQ21 691 aaPredicted RBP12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 MEX3BQ6ZN04 569 aaKnown RBP12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 DMRTC2Q8IXT2 367 aaPredicted RBP12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 ACBD4Q8NC06 268 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 OR6X1Q8NH79 312 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 ADAD1Q96M93 576 aaKnown RBP12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 SPOCK3Q9BQ16 436 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 HDHD5Q9BXW7 423 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 LINC00470Q9BZP3 86 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 DENND2DQ9H6A0 471 aaPredicted RBP12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 ASB6Q9NWX5 421 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 MALT1Q9UDY8 824 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 SIGLEC7Q9Y286 467 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 GPR52Q9Y2T5 361 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 FREM1Q5H8C1 2179 aa12.76□□□□□ -0.37
DNMT3A-208ENST00000466601 UPK3AO75631 287 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 NDUFB2O95178 105 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 GASTP01350 101 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 COX6B1P14854 86 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 ZNF26P17031 533 aaPredicted RBP12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 FASP25445 335 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 RPL4P36578 427 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 LGALS3BPQ08380 585 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 TSPAN31Q12999 210 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 CAMK2DQ13557 499 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 TAF11Q15544 211 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 TSC22D1Q15714 1073 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 ATP6AP1Q15904 470 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 ACKR1Q16570 336 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 LRRK2Q5S007 2527 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 ABHD12BQ7Z5M8 362 aaPredicted RBP12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 TMEM179BQ7Z7N9 219 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 IGFN1Q86VF2 1251 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 WDFY1Q8IWB7 410 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 C20orf196Q8IYI0 205 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 C10orf67Q8IYJ2 551 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 TMEM123Q8N131 208 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 AQP11Q8NBQ7 271 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 OR10G2Q8NGC3 310 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 GIPC3Q8TF64 312 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 PYDC1Q8WXC3 89 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 LRR1Q96L50 414 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 NDEL1Q9GZM8 345 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 TXNIPQ9H3M7 391 aa12.75□□□□□ -0.37
DNMT3A-208ENST00000466601 TUBAL3A6NHL2 446 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 NPIPB13A6NJU9 1138 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 NPIPB4C9JG80 1138 aa12.74□□□□□ -0.37
DNMT3A-208ENST00000466601 MCIDASD6RGH6 385 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms