RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 POLQO75417 2590 aa8.33□□□□□ -1.08
SDCCAG3-208ENST00000466579 SPG11Q96JI7 2443 aa8.33□□□□□ -1.08
SDCCAG3-208ENST00000466579 ANKRD17O75179 2603 aaKnown RBP8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 ZNF587BE7ETH6 402 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 KPNA4O00629 521 aaPredicted RBP8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 ACOT8O14734 319 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 SLC43A1O75387 559 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 UPK3AO75631 287 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 H1F0P07305 194 aaKnown RBP8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 ADORA3P0DMS8 318 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 ITGA2P17301 1181 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 FUT1P19526 365 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 ATP6V1B2P21281 511 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 DNAJA1P31689 397 aaKnown RBP8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 MAGEA2P43356 314 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 YAP1P46937 504 aaKnown RBP8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 NR1H2P55055 460 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 SH3BGRP55822 239 aaPredicted RBP8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 LSM11P83369 360 aaKnown RBP eCLIP8.32□□□□□ -1.082e-8■□□□□ 9.7
SDCCAG3-208ENST00000466579 MS4A2Q01362 244 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 POU3F1Q03052 451 aaPredicted RBP8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 TGFBR3Q03167 851 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 LGALS3BPQ08380 585 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 BNIP1Q12981 228 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 ANKDD1AQ495B1 522 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 DNAL1Q4LDG9 190 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 TMPRSS11FQ6ZWK6 438 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 ZNF627Q7L945 461 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 C10orf53Q8N6V4 93 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 WDR31Q8NA23 367 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 OR6X1Q8NH79 312 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 BPIFA2Q96DR5 249 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 ASB9Q96DX5 294 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 TXNDC15Q96J42 360 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 ADAD1Q96M93 576 aaKnown RBP8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 SEPHS2Q99611 448 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 PIP5K1AQ99755 562 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 OBP2BQ9NPH6 170 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 SLC17A5Q9NRA2 495 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 RHCGQ9UBD6 479 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 SLC25A15Q9Y619 301 aa8.32□□□□□ -1.08
SDCCAG3-208ENST00000466579 ARPC4-TTLL3A0A0A6YYG9 625 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 SLC35F4A4IF30 521 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 CENPBD1B2RD01 187 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 PIP5K1CO60331 668 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 RAD51DO75771 328 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 OR6A2O95222 327 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 IGHMP01871 453 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 HIST1H2ABP04908 130 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 IFI30P13284 250 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 IFNGR1P15260 489 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 MAKP20794 623 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 PAX7P23759 505 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 LIMS1P48059 325 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 SLC9A3P48764 834 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 ZNF133P52736 654 aaPredicted RBP8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 HMGA2P52926 109 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 RPL18Q07020 188 aaKnown RBP8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 TRAP1Q12931 704 aaKnown RBP8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 PPA1Q15181 289 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 HIST3H3Q16695 136 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 NCMAPQ5T1S8 102 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 ADAM5Q6NVV9 412 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 PODNL1Q6PEZ8 512 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 SLC35D2Q76EJ3 337 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 HIST3H2AQ7L7L0 130 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 NANOGNBQ7Z5D8 188 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 CDH24Q86UP0 819 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 DHFR2Q86XF0 187 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 NRMQ8IXM6 262 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 LRRC75AQ8NAA5 344 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 OR1K1Q8NGR3 316 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 BCL2L2Q92843 193 aaPredicted RBP8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 NINJ1Q92982 152 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 HIST1H2ACQ93077 130 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 TMEM54Q969K7 222 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 ZC3HAV1LQ96H79 300 aaKnown RBP8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 ALKBH3Q96Q83 286 aaPredicted RBP8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 BTBD10Q9BSF8 475 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 MRPL13Q9BYD1 178 aaKnown RBP8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 NELFAQ9H3P2 528 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 MAGIXQ9H6Y5 334 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 GPR35Q9HC97 309 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 NGBQ9NPG2 151 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 MED29Q9NX70 200 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 NPAP1Q9NZP6 1156 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 TMEM5Q9Y2B1 443 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 FAM32AQ9Y421 112 aaKnown RBP8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 CADP27708 2225 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 OTOGQ6ZRI0 2925 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 AKAP6Q13023 2319 aa8.31□□□□□ -1.08
SDCCAG3-208ENST00000466579 CIB4A0PJX0 185 aa8.3□□□□□ -1.08
SDCCAG3-208ENST00000466579 SH3PXD2BA1X283 911 aa8.3□□□□□ -1.08
SDCCAG3-208ENST00000466579 DPRXA6NFQ7 191 aa8.3□□□□□ -1.08
SDCCAG3-208ENST00000466579 C11orf98E9PRG8 122 aa8.3□□□□□ -1.08
SDCCAG3-208ENST00000466579 hCG_2039718K7EN88 272 aa8.3□□□□□ -1.08
SDCCAG3-208ENST00000466579 CDC42EP2O14613 210 aa8.3□□□□□ -1.08
SDCCAG3-208ENST00000466579 RNF13O43567 381 aa8.3□□□□□ -1.08
SDCCAG3-208ENST00000466579 PTP4A3O75365 173 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms