RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 MRPS18AQ9NVS2 196 aaKnown RBP4.93□□□□□ -1.62
VPS41-211ENST00000466017 GPR83Q9NYM4 423 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 ZNF229Q9UJW7 825 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 SLC6A5Q9Y345 797 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 TMED7Q9Y3B3 224 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 HDGFL3Q9Y3E1 203 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 ZNF337Q9Y3M9 751 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 GMPPBQ9Y5P6 360 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 CDH10Q9Y6N8 788 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 CUL9Q8IWT3 2517 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 MYO15AQ9UKN7 3530 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 CEP250Q9BV73 2442 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 A0A087WV48 116 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 TRAV17A0A0B4J275 112 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 TMEM72A0PK05 275 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 ENO4A6NNW6 628 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 EFCAB9A8MZ26 197 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 FTCDNL1E5RQL4 147 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 M0R3G1 203 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 MASP2O00187 686 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 CDC42EP2O14613 210 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 BCKDKO14874 412 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 RRP8O43159 456 aaKnown RBP4.92□□□□□ -1.62
VPS41-211ENST00000466017 SEC14L5O43304 696 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 EFNA2O43921 213 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 NME2P1O60361 137 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 MITFO75030 526 aaPredicted RBP4.92□□□□□ -1.62
VPS41-211ENST00000466017 SLC25A12O75746 678 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 GLSO94925 669 aaPredicted RBP4.92□□□□□ -1.62
VPS41-211ENST00000466017 NUDT14O95848 222 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 TXNDC12O95881 172 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 BGLAPP02818 100 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 HPNP05981 417 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 PEPDP12955 493 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 POU2F1P14859 743 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 MAKP20794 623 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 DPP4P27487 766 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 SLC6A6P31641 620 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 GRK5P34947 590 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 TNFSF10P50591 281 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 CCL11P51671 97 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 CHN2P52757 468 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 CDC42P60953 191 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 CD69Q07108 199 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 CRYZQ08257 329 aaKnown RBP4.92□□□□□ -1.62
VPS41-211ENST00000466017 SELENBP1Q13228 472 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 SRSF6Q13247 344 aaKnown RBP4.92□□□□□ -1.62
VPS41-211ENST00000466017 RIN1Q13671 783 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 RAPSNQ13702 412 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 PDK3Q15120 406 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 OR1C1Q15619 314 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 ZIK1Q3SY52 487 aaPredicted RBP4.92□□□□□ -1.62
VPS41-211ENST00000466017 C6orf141Q5SZD1 244 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 C6orf52Q5T4I8 152 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 MEDAGQ5VYS4 303 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 SPINK14Q6IE38 97 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 SLC27A4Q6P1M0 643 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 C3orf33Q6P1S2 294 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 SMARCD3Q6STE5 483 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 ARSKQ6UWY0 536 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 DPY19L2P2Q6ZN68 376 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 OAFQ86UD1 273 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 LNX2Q8N448 690 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 SCAIQ8N9R8 606 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 OR5M3Q8NGP4 307 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 PFN4Q8NHR9 129 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 CYGBQ8WWM9 190 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 HDAC2Q92769 488 aaKnown RBP4.92□□□□□ -1.62
VPS41-211ENST00000466017 TAAR8Q969N4 342 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 Q96MT0 163 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 SIGLEC12Q96PQ1 595 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 TNFRSF13CQ96RJ3 184 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 DDOQ99489 341 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 KLHDC3Q9BQ90 382 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 PIGQQ9BRB3 760 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 PTDSS2Q9BVG9 487 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 NDEL1Q9GZM8 345 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 OR52D1Q9H346 318 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 ZNF696Q9H7X3 374 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 NRIP3Q9NQ35 241 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 ING3Q9NXR8 418 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 TUBA8Q9NY65 449 aaPredicted RBP4.92□□□□□ -1.62
VPS41-211ENST00000466017 MRPL39Q9NYK5 338 aaKnown RBP4.92□□□□□ -1.62
VPS41-211ENST00000466017 UBAP1Q9NZ09 502 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 CHRNA9Q9UGM1 479 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 FBXL2Q9UKC9 423 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 MYRFQ9Y2G1 1151 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 EML6Q6ZMW3 1958 aa4.92□□□□□ -1.62
VPS41-211ENST00000466017 ZNF292O60281 2723 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 TMEM8BA6NDV4 472 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 LRRC3CA6NJW4 275 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 TRIM64CA6NLI5 447 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 SNTNA6NMZ2 147 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 GJE1A6NN92 205 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 CENPBD1B2RD01 187 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 BHLHE40O14503 412 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 AHCYL1O43865 530 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 EIF1BO60739 113 aaKnown RBP4.91□□□□□ -1.62
VPS41-211ENST00000466017 NDUFB2O95178 105 aa4.91□□□□□ -1.62
VPS41-211ENST00000466017 VAMP5O95183 116 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms