RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 PRPH2P23942 346 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 FKBP2P26885 142 aaKnown RBP12.67□□□□□ -0.38
HDAC6-214ENST00000465269 ETV4P43268 484 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 CRYBB2P43320 205 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 AQP5P55064 265 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 SH3BGRP55822 239 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-214ENST00000465269 ERVS71-1P61550 626 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 SEC61A1P61619 476 aaKnown RBP12.67□□□□□ -0.38
HDAC6-214ENST00000465269 GLO1Q04760 184 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 FUT5Q11128 374 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 ZNF154Q13106 437 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 ARHGAP11BQ3KRB8 267 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 PRAMEF8Q5VWM4 474 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 PRAMEF7Q5VXH5 474 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 C16orf62Q7Z3J2 963 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 TREML1Q86YW5 311 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 IL17RDQ8NFM7 739 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 PSMA8Q8TAA3 256 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 CCDC126Q96EE4 140 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 PKNOX2Q96KN3 472 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 LINC00470Q9BZP3 86 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 TUBB1Q9H4B7 451 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 DCAF16Q9NXF7 216 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 C1RLQ9NZP8 487 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 TESQ9UGI8 421 aaKnown RBP12.67□□□□□ -0.38
HDAC6-214ENST00000465269 ATP6V1HQ9UI12 483 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 SLC35A3Q9Y2D2 325 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 CFLARO15519 480 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 C1QCP02747 245 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 BPGMP07738 259 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 PATE4P0C8F1 98 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 FAM157BP0CG42 384 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 OR12D1P0DN82 309 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 HPCAL1P37235 193 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 PTDSS1P48651 473 aaKnown RBP12.66□□□□□ -0.38
HDAC6-214ENST00000465269 HBA1P69905 142 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 KCNJ10P78508 379 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 FAM189A2Q15884 450 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 HHATQ5VTY9 493 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 TMEM154Q6P9G4 183 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 FIP1L1Q6UN15 594 aaKnown RBP12.66□□□□□ -0.38
HDAC6-214ENST00000465269 FRRS1Q6ZNA5 592 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 C6orf120Q7Z4R8 191 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 NUDCD3Q8IVD9 361 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 KRTCAP2Q8N6L1 136 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 OR4F5Q8NH21 305 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 SFXN5Q8TD22 340 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 PMM1Q92871 262 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 GATA5Q9BWX5 397 aaPredicted RBP12.66□□□□□ -0.38
HDAC6-214ENST00000465269 OR51I1Q9H343 314 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 MARCH7Q9H992 704 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 MOV10Q9HCE1 1003 aaKnown RBP12.66□□□□□ -0.38
HDAC6-214ENST00000465269 NKIRAS1Q9NYS0 192 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 WDR45Q9Y484 360 aa12.66□□□□□ -0.38
HDAC6-214ENST00000465269 DNAH9Q9NYC9 4486 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 PRAMEF27A3QJZ7 478 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 RPL36A-HNRNPH2H7BZ11 118 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 SLC28A1O00337 649 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 TRAF3IP2O43734 574 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-214ENST00000465269 TRIM13O60858 407 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 NEFHP12036 1026 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 HTR3AP46098 478 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 GIPRP48546 466 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 WDR4P57081 412 aaKnown RBP12.65□□□□□ -0.38
HDAC6-214ENST00000465269 DNAJB13P59910 316 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 GALK2Q01415 458 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 PTGR1Q14914 329 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 RAB39AQ14964 217 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 TAF9Q16594 264 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 GSG1Q2KHT4 349 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 HSP90B2PQ58FF3 399 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 CFAP157Q5JU67 520 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 ZCCHC23Q6ZST2 131 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 FRMD7Q6ZUT3 714 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 GPR137CQ8N3F9 429 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 PAQR4Q8N4S7 273 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-214ENST00000465269 CCL17Q92583 94 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 RAB1CQ92928 201 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 MTERF3Q96E29 417 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 SLC35G5Q96KT7 338 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 ZNF224Q9NZL3 707 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 ZNF346Q9UL40 294 aaKnown RBP12.65□□□□□ -0.38
HDAC6-214ENST00000465269 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.65□□□□□ -0.38
HDAC6-214ENST00000465269 BIRC6Q9NR09 4857 aa12.65□□□□□ -0.38
HDAC6-214ENST00000465269 CLPSL1A2RUU4 121 aa12.64□□□□□ -0.39
HDAC6-214ENST00000465269 C3orf80F5H4A9 247 aa12.64□□□□□ -0.39
HDAC6-214ENST00000465269 M0R3G1 203 aa12.64□□□□□ -0.39
HDAC6-214ENST00000465269 LSM1O15116 133 aaKnown RBP12.64□□□□□ -0.39
HDAC6-214ENST00000465269 FRS3O43559 492 aa12.64□□□□□ -0.39
HDAC6-214ENST00000465269 SLC43A1O75387 559 aa12.64□□□□□ -0.39
HDAC6-214ENST00000465269 UROSP10746 265 aa12.64□□□□□ -0.39
HDAC6-214ENST00000465269 CCL2P13500 99 aa12.64□□□□□ -0.39
HDAC6-214ENST00000465269 CHI3L2Q15782 390 aa12.64□□□□□ -0.39
HDAC6-214ENST00000465269 SPRNQ5BIV9 151 aa12.64□□□□□ -0.39
HDAC6-214ENST00000465269 CARD17Q5XLA6 110 aa12.64□□□□□ -0.39
HDAC6-214ENST00000465269 TNFAIP8L2Q6P589 184 aaPredicted RBP12.64□□□□□ -0.39
HDAC6-214ENST00000465269 R3HCC1LQ7Z5L2 792 aaKnown RBP12.64□□□□□ -0.39
HDAC6-214ENST00000465269 CLECL1Q8IZS7 167 aa12.64□□□□□ -0.39
HDAC6-214ENST00000465269 FGFBP3Q8TAT2 258 aa12.64□□□□□ -0.39
HDAC6-214ENST00000465269 MRAPQ8TCY5 172 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms