RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 PLA2G4DQ86XP0 818 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 EGFL6Q8IUX8 553 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 PSTKQ8IV42 348 aaKnown RBP1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 TMEM61Q8N0U2 210 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 RNF175Q8N4F7 328 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 ZADH2Q8N4Q0 377 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 OR4F15Q8NGB8 312 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 OR1L6Q8NGR2 347 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 OR2G3Q8NGZ4 309 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 OR9G1Q8NH87 305 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 GIMAP1Q8WWP7 306 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 SHC3Q92529 594 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 SMARCD2Q92925 531 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 ZNF641Q96N77 438 aaPredicted RBP1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 PANX2Q96RD6 677 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 FMO2Q99518 471 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 SH3GL1Q99961 368 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 PELOQ9BRX2 385 aaKnown RBP1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 SLC25A39Q9BZJ4 359 aaPredicted RBP1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 ROGDIQ9GZN7 287 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 GBA3Q9H227 469 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 NT5MQ9NPB1 228 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 ZNF331Q9NQX6 463 aaPredicted RBP1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 EXD2Q9NVH0 621 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 RBAKQ9NYW8 714 aaPredicted RBP1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 SLC25A37Q9NYZ2 338 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 BFARQ9NZS9 450 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 SPATA7Q9P0W8 599 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 TRAF3IP3Q9Y228 551 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 N6AMT1Q9Y5N5 214 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 CARMIL3Q8ND23 1372 aa1.2□□□□□ -2.22
NUCKS1-202ENST00000464938 XKRY2A2RUG3 117 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 RBMY1BA6NDE4 496 aaKnown RBP1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 RBMY1EA6NEQ0 496 aaKnown RBP1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 ZNF726A6NNF4 738 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 H0Y8G0 127 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 GOLGA8SH3BPF8 625 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 PES1O00541 588 aaKnown RBP1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 CCL21O00585 134 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 CA11O75493 328 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 TNFSF13O75888 250 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 CST1P01037 141 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 IGLV2-23P01705 113 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 PRB2P02812 416 aaPredicted RBP1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 MMP1P03956 469 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 RBMY1DP0C7P1 496 aaKnown RBP1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 UBTFL1P0CB47 393 aaPredicted RBP1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 RBMY1A1P0DJD3 496 aaKnown RBP1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 SMIM10L1P0DMW3 83 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 SLC2A3P11169 496 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 TOP1P11387 765 aaKnown RBP1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 ZNF43P17038 809 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 HSD17B2P37059 387 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 SSR1P43307 286 aaKnown RBP1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 GPR6P46095 362 aaPredicted RBP1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 SULT1E1P49888 294 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 SH3BGRP55822 239 aaPredicted RBP1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 ACTR3P61158 418 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 BST2Q10589 180 aaKnown RBP1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 MRPL28Q13084 256 aaKnown RBP1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 IDI1Q13907 227 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 ZMYND11Q15326 602 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 SGCAQ16586 387 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 RABL6Q3YEC7 729 aaPredicted RBP1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 LRRC10Q5BKY1 277 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 CYB5R2Q6BCY4 276 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 TRIM40Q6P9F5 258 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 UTS2BQ765I0 119 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 C6orf120Q7Z4R8 191 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 TMEM135Q86UB9 458 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 LHFPL3Q86UP9 236 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 TGIF2LXQ8IUE1 241 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 ZNF557Q8N988 423 aaPredicted RBP1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 Q8N9L7 120 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 FNDC5Q8NAU1 212 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 SDR9C7Q8NEX9 313 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 OR1N2Q8NGR9 330 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 MCOLN3Q8TDD5 553 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 PHF3Q92576 2039 aaKnown RBP1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 IL22RA2Q969J5 263 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 SMIM10Q96HG1 83 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 PLEKHA8Q96JA3 519 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 TCEANC2Q96MN5 208 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 OR8B4Q96RC9 309 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 SORT1Q99523 831 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 NAT9Q9BTE0 207 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 GCOM2Q9BZD3 368 aaPredicted RBP1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 SIAEQ9HAT2 523 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 ZFP14Q9HCL3 533 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 KCNIP1Q9NZI2 227 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 STOX2Q9P2F5 926 aaPredicted RBP1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 SLC7A8Q9UHI5 535 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 RAB26Q9ULW5 256 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 MMP17Q9ULZ9 603 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 HPCAL4Q9UM19 191 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 TRAPPC4Q9Y296 219 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 CSDC2Q9Y534 153 aaKnown RBP1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 SLC25A15Q9Y619 301 aa1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 F11RQ9Y624 299 aaKnown RBP1.19□□□□□ -2.22
NUCKS1-202ENST00000464938 WSB1Q9Y6I7 421 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms