RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 ZNF225Q9UK10 706 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 RABL2BQ9UNT1 228 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 MEGF6O75095 1541 aa2.76□□□□□ -1.97
CLK1-208ENST00000464454 A0A0G2JLM5 398 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 A0A1W2PPV9 198 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 PINLYPA6NC86 204 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 CCDC169A6NNP5 214 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 PSTPIP1O43586 416 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 TNFSF13O75888 250 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 TMEM50AO95807 157 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 IGHV2-5P01817 119 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 GAPDHP04406 335 aaKnown RBP2.75□□□□□ -1.97
CLK1-208ENST00000464454 C2P06681 752 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 TDGF1P13385 188 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 TCN1P20061 433 aaPredicted RBP2.75□□□□□ -1.97
CLK1-208ENST00000464454 KITLGP21583 273 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 IFNA8P32881 189 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 BTCP35070 178 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 CSNK1DP48730 415 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 TDGF1P3P51864 188 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 CKAP4Q07065 602 aaKnown RBP2.75□□□□□ -1.97
CLK1-208ENST00000464454 PPIL2Q13356 520 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 GPNMBQ14956 572 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 MPPED2Q15777 294 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 TRIM40Q6P9F5 258 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 ACP7Q6ZNF0 438 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 CDR2LQ86X02 465 aaPredicted RBP2.75□□□□□ -1.97
CLK1-208ENST00000464454 TMEM61Q8N0U2 210 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 SDR9C7Q8NEX9 313 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 VN1R2Q8NFZ6 395 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 OR10G9Q8NGN4 311 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 OR1N2Q8NGR9 330 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 AKR7LQ8NHP1 331 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 RDH5Q92781 318 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 HSFY1Q96LI6 401 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 OR8B4Q96RC9 309 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 SORT1Q99523 831 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 PLIN2Q99541 437 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 SH3GL1Q99961 368 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 SRMSQ9H3Y6 488 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 ADAP2Q9NPF8 381 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 CACNG2Q9Y698 323 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 PDS5BQ9NTI5 1447 aa2.75□□□□□ -1.97
CLK1-208ENST00000464454 CDHR2Q9BYE9 1310 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 LTBP1Q14766 1721 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 NOTCH2Q04721 2471 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 IGLV3-22A0A075B6J6 115 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 TRIM64CA6NLI5 447 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 PANO1I0J062 215 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 CCL21O00585 134 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 SLC31A2O15432 143 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 TRAF3IP2O43734 574 aaPredicted RBP2.74□□□□□ -1.97
CLK1-208ENST00000464454 CIB2O75838 187 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 ALDOBP05062 364 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 CRISP2P16562 243 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 ZNF17P17021 662 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 ZNF133P52736 654 aaPredicted RBP2.74□□□□□ -1.97
CLK1-208ENST00000464454 FBXW4P57775 412 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 PLP1P60201 277 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 KCNJ2P63252 427 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 KIAA0087Q14695 138 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 ARHGAP19Q14CB8 494 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 PPP1R7Q15435 360 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 LRRC10Q5BKY1 277 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 CCDC183Q5T5S1 534 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 FRMPD2BQ6IN97 320 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 SLC25A48Q6ZT89 311 aaKnown RBP2.74□□□□□ -1.97
CLK1-208ENST00000464454 FAM228AQ86W67 206 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 CDH26Q8IXH8 852 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 MKXQ8IYA7 352 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 OR2G2Q8NGZ5 317 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 OR6X1Q8NH79 312 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 SDHCQ99643 169 aaPredicted RBP2.74□□□□□ -1.97
CLK1-208ENST00000464454 KCTD14Q9BQ13 255 aaPredicted RBP2.74□□□□□ -1.97
CLK1-208ENST00000464454 HES7Q9BYE0 225 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 DEFB127Q9H1M4 99 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 EML4Q9HC35 981 aaKnown RBP2.74□□□□□ -1.97
CLK1-208ENST00000464454 ZFP14Q9HCL3 533 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 CCL28Q9NRJ3 127 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 SPATA7Q9P0W8 599 aa2.74□□□□□ -1.97
CLK1-208ENST00000464454 KIR2DL5BA0A0G2JN68 375 aa2.73□□□□□ -1.97
CLK1-208ENST00000464454 KIR2DL5BA0A0G2JPC4 375 aa2.73□□□□□ -1.97
CLK1-208ENST00000464454 FAM47DPA6NHR8 397 aa2.73□□□□□ -1.97
CLK1-208ENST00000464454 AP3B1O00203 1094 aa2.73□□□□□ -1.97
CLK1-208ENST00000464454 DYNC1I1O14576 645 aa2.73□□□□□ -1.97
CLK1-208ENST00000464454 SOX15O60248 233 aa2.73□□□□□ -1.97
CLK1-208ENST00000464454 UPK3AO75631 287 aa2.73□□□□□ -1.97
CLK1-208ENST00000464454 C1orf105O95561 183 aa2.73□□□□□ -1.97
CLK1-208ENST00000464454 UQCRFS1P1P0C7P4 283 aa2.73□□□□□ -1.97
CLK1-208ENST00000464454 TNNI1P19237 187 aa2.73□□□□□ -1.97
CLK1-208ENST00000464454 RORAP35398 523 aa2.73□□□□□ -1.97
CLK1-208ENST00000464454 ATP5C1P36542 298 aaKnown RBP2.73□□□□□ -1.97
CLK1-208ENST00000464454 SLC26A3P40879 764 aa2.73□□□□□ -1.97
CLK1-208ENST00000464454 GPR6P46095 362 aaPredicted RBP2.73□□□□□ -1.97
CLK1-208ENST00000464454 NPBWR2P48146 333 aa2.73□□□□□ -1.97
CLK1-208ENST00000464454 SUCLG1P53597 346 aaKnown RBP2.73□□□□□ -1.97
CLK1-208ENST00000464454 UGT2B15P54855 530 aa2.73□□□□□ -1.97
CLK1-208ENST00000464454 ACVR1Q04771 509 aa2.73□□□□□ -1.97
CLK1-208ENST00000464454 UNC119Q13432 240 aa2.73□□□□□ -1.97
CLK1-208ENST00000464454 RNASEKQ6P5S7 137 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms