RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 MRPL19P49406 292 aaKnown RBP8.35□□□□□ -1.07
HPS4-208ENST00000464362 CSNK1EP49674 416 aaKnown RBP8.35□□□□□ -1.07
HPS4-208ENST00000464362 RGS19P49795 217 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 ADPRHP54922 357 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 HERV-K104P61576 105 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 MFSD13AQ14CX5 517 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 FAM122CQ6P4D5 195 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 GSG1LQ6UXU4 331 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 UNQ6126/PRO20091Q6UXV3 157 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 OR51S1Q8NGJ8 323 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 GAS2L1Q99501 681 aaPredicted RBP8.35□□□□□ -1.07
HPS4-208ENST00000464362 PSD2Q9BQI7 771 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 SELENOIQ9C0D9 397 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 SLC6A20Q9NP91 592 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 RNF215Q9Y6U7 377 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 POLEQ07864 2286 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 PRAMEF26H0Y7S4 382 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 PRAF2O60831 178 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 CD14P08571 375 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 GABRB1P18505 474 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 HTR2AP28223 471 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 AGTR1P30556 359 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 HNRNPKP61978 463 aaKnown RBP eCLIP8.35□□□□□ -1.07
HPS4-208ENST00000464362 GK2Q14410 553 aaPredicted RBP8.35□□□□□ -1.07
HPS4-208ENST00000464362 CDKN3Q16667 212 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 MPEG1Q2M385 716 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 Q499Y3 187 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 SMUG1Q53HV7 270 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 ZNF585AQ6P3V2 769 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 LRRC69Q6ZNQ3 347 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 HDAC8Q9BY41 377 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 CMC2Q9NRP2 79 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 INPP5EQ9NRR6 644 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 GPATCH2Q9NW75 528 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 DKKL1Q9UK85 242 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 SIPA1L1O43166 1804 aa8.35□□□□□ -1.07
HPS4-208ENST00000464362 IDSB3KWA1 339 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 DVL2O14641 736 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 CHP2O43745 196 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 CEACAM5P06731 702 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 GPLD1P80108 840 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 LPAL2Q16609 132 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 GLYR1Q49A26 553 aaPredicted RBP8.34□□□□□ -1.07
HPS4-208ENST00000464362 PRAMEF20Q5VT98 475 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 ZNF704Q6ZNC4 412 aaPredicted RBP8.34□□□□□ -1.07
HPS4-208ENST00000464362 RHOUQ7L0Q8 258 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 ZSCAN1Q8NBB4 408 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 STEAP2Q8NFT2 490 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 OR5H2Q8NGV7 314 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 THRSPQ92748 146 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 FCRL1Q96LA6 429 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 RPP25Q9BUL9 199 aaKnown RBP8.34□□□□□ -1.07
HPS4-208ENST00000464362 HRH4Q9H3N8 390 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 SPTAN1Q13813 2472 aaKnown RBP8.34□□□□□ -1.07
HPS4-208ENST00000464362 KIR2DS5A0A0G2JLQ3 304 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 A0A0G2JNG1 304 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 TMEM82A0PJX8 343 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 NAP1L6A6NFF2 107 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 E9PI62 339 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 KIR2DS3K7RE56 304 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 CDC42EP2O14613 210 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 IGHA2P01877 340 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 CSF1P09603 554 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 GNRHRP30968 328 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 DCTDP32321 178 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 GLP1RP43220 463 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 RAP2BP61225 183 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 DPTQ07507 201 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 CAMK2DQ13557 499 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 KIR2DS5Q14953 304 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 CORO6Q6QEF8 472 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 MARCH3Q86UD3 253 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 ZNF454Q8N9F8 522 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 ZNF565Q8N9K5 539 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 MFSD8Q8NHS3 518 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 SCGB3A2Q96PL1 93 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 LMF2Q9BU23 707 aaKnown RBP8.34□□□□□ -1.07
HPS4-208ENST00000464362 CRB3Q9BUF7 120 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 PTDSS2Q9BVG9 487 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 ZNF442Q9H7R0 627 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 CAMK2AQ9UQM7 478 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 MIA3Q5JRA6 1907 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 NPC1O15118 1278 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 LILRB3O75022 631 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 MVDP53602 400 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 EMP2P54851 167 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 ZXDCQ2QGD7 858 aaPredicted RBP8.34□□□□□ -1.07
HPS4-208ENST00000464362 ESCO2Q56NI9 601 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 KRBOX4Q5JUW0 171 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 UBE2NLQ5JXB2 153 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 FBXO46Q6PJ61 603 aaPredicted RBP8.34□□□□□ -1.07
HPS4-208ENST00000464362 RFPL4BQ6ZWI9 263 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 CMTM4Q8IZR5 234 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 C3orf49Q96BT1 292 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 PHB2Q99623 299 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 PELOQ9BRX2 385 aaKnown RBP8.34□□□□□ -1.07
HPS4-208ENST00000464362 ZNF436Q9C0F3 470 aaPredicted RBP8.34□□□□□ -1.07
HPS4-208ENST00000464362 OR11A1Q9GZK7 315 aa8.34□□□□□ -1.07
HPS4-208ENST00000464362 LMAN1LQ9HAT1 526 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms