RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 GPR35Q9HC97 309 aa11.34□□□□□ -0.59
XRN1-203ENST00000463916 NANSQ9NR45 359 aa11.34□□□□□ -0.59
XRN1-203ENST00000463916 C20orf141Q9NUB4 165 aa11.34□□□□□ -0.59
XRN1-203ENST00000463916 OR6C65A6NJZ3 312 aa11.33□□□□□ -0.6
XRN1-203ENST00000463916 E7EQL1 145 aa11.33□□□□□ -0.6
XRN1-203ENST00000463916 M0R3G1 203 aa11.33□□□□□ -0.6
XRN1-203ENST00000463916 CXCR6O00574 342 aa11.33□□□□□ -0.6
XRN1-203ENST00000463916 SLC43A1O75387 559 aa11.33□□□□□ -0.6
XRN1-203ENST00000463916 CD8AP01732 235 aa11.33□□□□□ -0.6
XRN1-203ENST00000463916 ASAH2BP0C7U1 165 aa11.33□□□□□ -0.6
XRN1-203ENST00000463916 PTAFRP25105 342 aa11.33□□□□□ -0.6
XRN1-203ENST00000463916 PTH2RP49190 550 aa11.33□□□□□ -0.6
XRN1-203ENST00000463916 PRPS1P60891 318 aa11.33□□□□□ -0.6
XRN1-203ENST00000463916 ARF1P84077 181 aaKnown RBP11.33□□□□□ -0.6
XRN1-203ENST00000463916 B3GLCTQ6Y288 498 aa11.33□□□□□ -0.6
XRN1-203ENST00000463916 GSX2Q9BZM3 304 aa11.33□□□□□ -0.6
XRN1-203ENST00000463916 SLC19A3Q9BZV2 496 aa11.33□□□□□ -0.6
XRN1-203ENST00000463916 FKRPQ9H9S5 495 aa11.33□□□□□ -0.6
XRN1-203ENST00000463916 ZNF701Q9NV72 531 aaPredicted RBP11.33□□□□□ -0.6
XRN1-203ENST00000463916 ABCD2Q9UBJ2 740 aa11.33□□□□□ -0.6
XRN1-203ENST00000463916 A4GNTQ9UNA3 340 aa11.33□□□□□ -0.6
XRN1-203ENST00000463916 AP3M1Q9Y2T2 418 aa11.33□□□□□ -0.6
XRN1-203ENST00000463916 AMDHD2Q9Y303 409 aa11.33□□□□□ -0.6
XRN1-203ENST00000463916 NOX1Q9Y5S8 564 aa11.33□□□□□ -0.6
XRN1-203ENST00000463916 HEATR1Q9H583 2144 aaKnown RBP11.33□□□□□ -0.6
XRN1-203ENST00000463916 ZNF503-AS2A6NEH8 195 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 OVOL3O00110 214 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 SEC14L2O76054 403 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 OR5F1O95221 314 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 NCK1P16333 377 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 YAP1P46937 504 aaKnown RBP11.32□□□□□ -0.6
XRN1-203ENST00000463916 CDH11P55287 796 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 PSME3P61289 254 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 CAMK2DQ13557 499 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 CEACAM16Q2WEN9 425 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 HMBOX1Q6NT76 420 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 SLC22A25Q6T423 547 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 KLHL17Q6TDP4 642 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 C20orf196Q8IYI0 205 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 GPR137CQ8N3F9 429 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 PIK3C3Q8NEB9 887 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 NSRP1Q9H0G5 558 aaKnown RBP11.32□□□□□ -0.6
XRN1-203ENST00000463916 J3KTA2 159 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 FFAR1O14842 300 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 MT-ND1P03886 318 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 IFNGR1P15260 489 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 PAX1P15863 534 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 SHEQ5VZ18 495 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 ANKRD16Q6P6B7 361 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 RNF148Q8N7C7 305 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 RBM15BQ8NDT2 890 aaKnown RBP11.32□□□□□ -0.6
XRN1-203ENST00000463916 ANKK1Q8NFD2 765 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 TMEM239Q8WW34 195 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 RHCGQ9UBD6 479 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 ZNF229Q9UJW7 825 aa11.32□□□□□ -0.6
XRN1-203ENST00000463916 IGHV1-18A0A0C4DH31 117 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 ZNF682O95780 498 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 SERPINA1P01009 418 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 FUT1P19526 365 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 PRDX6P30041 224 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 CDKN1AP38936 164 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 BIDP55957 195 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 ZP4Q12836 540 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 CBLL1Q75N03 491 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 TSEN54Q7Z6J9 526 aaKnown RBP11.31□□□□□ -0.6
XRN1-203ENST00000463916 YTHDF3Q7Z739 585 aaKnown RBP11.31□□□□□ -0.6
XRN1-203ENST00000463916 CIARTQ8N365 385 aaPredicted RBP11.31□□□□□ -0.6
XRN1-203ENST00000463916 RADILQ96JH8 1075 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 SMR3AQ99954 134 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 KCTD14Q9BQ13 255 aaPredicted RBP11.31□□□□□ -0.6
XRN1-203ENST00000463916 POLR2J2Q9GZM3 115 aaKnown RBP11.31□□□□□ -0.6
XRN1-203ENST00000463916 POLR2J3Q9H1A7 115 aaKnown RBP11.31□□□□□ -0.6
XRN1-203ENST00000463916 GSX1Q9H4S2 264 aaPredicted RBP11.31□□□□□ -0.6
XRN1-203ENST00000463916 CXorf56Q9H5V9 222 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 SEC61A2Q9H9S3 476 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 EGFL7Q9UHF1 273 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 MGAT4BQ9UQ53 548 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 BLOC1S5-TXNDC5H3BN57 136 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 GSTA4O15217 222 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 ARHGEF9O43307 516 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 RNF13O43567 381 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 PIP5K1CO60331 668 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 OR6A2O95222 327 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 WNT11O96014 354 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 UMPSP11172 480 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 RBM34P42696 430 aaKnown RBP11.31□□□□□ -0.6
XRN1-203ENST00000463916 RPS4XP62701 263 aaKnown RBP11.31□□□□□ -0.6
XRN1-203ENST00000463916 KLHL24Q6TFL4 600 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 SLC35D2Q76EJ3 337 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 MYPOPQ86VE0 399 aaPredicted RBP11.31□□□□□ -0.6
XRN1-203ENST00000463916 MEX3DQ86XN8 651 aaKnown RBP11.31□□□□□ -0.6
XRN1-203ENST00000463916 FAM156AQ8NDB6 213 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 MAGEE2Q8TD90 523 aaPredicted RBP11.31□□□□□ -0.6
XRN1-203ENST00000463916 LZICQ8WZA0 190 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 LRR1Q96L50 414 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 Q96MF0 132 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 MAN2C1Q9NTJ4 1040 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 ARL8BQ9NVJ2 186 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 MOKQ9UQ07 419 aa11.31□□□□□ -0.6
XRN1-203ENST00000463916 ARL2BPQ9Y2Y0 163 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms