RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 UPB1Q9UBR1 384 aa15.54■□□□□ 0.08
VPS52-214ENST00000463486 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.53■□□□□ 0.08
VPS52-214ENST00000463486 SLC35F4A4IF30 521 aa15.53■□□□□ 0.08
VPS52-214ENST00000463486 OR6C65A6NJZ3 312 aa15.53■□□□□ 0.08
VPS52-214ENST00000463486 ACOT8O14734 319 aa15.53■□□□□ 0.08
VPS52-214ENST00000463486 RAD51DO75771 328 aa15.53■□□□□ 0.08
VPS52-214ENST00000463486 BNIP1Q12981 228 aa15.53■□□□□ 0.08
VPS52-214ENST00000463486 C9orf135Q5VTT2 229 aa15.53■□□□□ 0.08
VPS52-214ENST00000463486 LCN8Q6JVE9 175 aa15.53■□□□□ 0.08
VPS52-214ENST00000463486 MBOAT2Q6ZWT7 520 aa15.53■□□□□ 0.08
VPS52-214ENST00000463486 MEX3DQ86XN8 651 aaKnown RBP15.53■□□□□ 0.08
VPS52-214ENST00000463486 WFDC8Q8IUA0 241 aa15.53■□□□□ 0.08
VPS52-214ENST00000463486 C20orf196Q8IYI0 205 aa15.53■□□□□ 0.08
VPS52-214ENST00000463486 RNF113BQ8IZP6 322 aaKnown RBP15.53■□□□□ 0.08
VPS52-214ENST00000463486 ANKK1Q8NFD2 765 aa15.53■□□□□ 0.08
VPS52-214ENST00000463486 BPIFA2Q96DR5 249 aa15.53■□□□□ 0.08
VPS52-214ENST00000463486 TMEM204Q9BSN7 226 aa15.53■□□□□ 0.08
VPS52-214ENST00000463486 NPAP1Q9NZP6 1156 aa15.53■□□□□ 0.08
VPS52-214ENST00000463486 SLC25A15Q9Y619 301 aa15.53■□□□□ 0.08
VPS52-214ENST00000463486 V9GYQ6 96 aa15.53■□□□□ 0.08
VPS52-214ENST00000463486 TRBV4-1A0A0J9YWV2 114 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 C11orf98E9PRG8 122 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 SLC43A1O75387 559 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 IFI30P13284 250 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 IFNGR1P15260 489 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 AHCYP23526 432 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 IFNA8P32881 189 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 AQP2P41181 271 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 RPS4XP62701 263 aaKnown RBP15.52■□□□□ 0.08
VPS52-214ENST00000463486 RPL18Q07020 188 aaKnown RBP15.52■□□□□ 0.08
VPS52-214ENST00000463486 LAPTM4AQ15012 233 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 SEC23BQ15437 767 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 BEX5Q5H9J7 111 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 OR7E24Q6IFN5 339 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 PODNL1Q6PEZ8 512 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 PIWIL3Q7Z3Z3 882 aaKnown RBP15.52■□□□□ 0.08
VPS52-214ENST00000463486 C1orf162Q8NEQ5 155 aaPredicted RBP15.52■□□□□ 0.08
VPS52-214ENST00000463486 MOSPD2Q8NHP6 518 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 BCL2L2Q92843 193 aaPredicted RBP15.52■□□□□ 0.08
VPS52-214ENST00000463486 PIK3IP1Q96FE7 263 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 LRR1Q96L50 414 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 ALKBH3Q96Q83 286 aaPredicted RBP15.52■□□□□ 0.08
VPS52-214ENST00000463486 PIP5K1AQ99755 562 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 NELFAQ9H3P2 528 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 MUC13Q9H3R2 512 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 IL1RAPQ9NPH3 570 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 HIF3AQ9Y2N7 669 aa15.52■□□□□ 0.08
VPS52-214ENST00000463486 DPRXA6NFQ7 191 aa15.51■□□□□ 0.07
VPS52-214ENST00000463486 BLOC1S5-TXNDC5H3BN57 136 aa15.51■□□□□ 0.07
VPS52-214ENST00000463486 CDC42EP2O14613 210 aa15.51■□□□□ 0.07
VPS52-214ENST00000463486 HIST1H2ABP04908 130 aa15.51■□□□□ 0.07
VPS52-214ENST00000463486 H1F0P07305 194 aaKnown RBP15.51■□□□□ 0.07
VPS52-214ENST00000463486 IL1RL1Q01638 556 aa15.51■□□□□ 0.07
VPS52-214ENST00000463486 TMPRSS11FQ6ZWK6 438 aa15.51■□□□□ 0.07
VPS52-214ENST00000463486 SLC35D2Q76EJ3 337 aa15.51■□□□□ 0.07
VPS52-214ENST00000463486 HIST3H2AQ7L7L0 130 aa15.51■□□□□ 0.07
VPS52-214ENST00000463486 NANOGNBQ7Z5D8 188 aa15.51■□□□□ 0.07
VPS52-214ENST00000463486 CYP4Z1Q86W10 505 aa15.51■□□□□ 0.07
VPS52-214ENST00000463486 LRRC75AQ8NAA5 344 aa15.51■□□□□ 0.07
VPS52-214ENST00000463486 OR1K1Q8NGR3 316 aa15.51■□□□□ 0.07
VPS52-214ENST00000463486 OR6X1Q8NH79 312 aa15.51■□□□□ 0.07
VPS52-214ENST00000463486 HIST1H2ACQ93077 130 aa15.51■□□□□ 0.07
VPS52-214ENST00000463486 ASB9Q96DX5 294 aa15.51■□□□□ 0.07
VPS52-214ENST00000463486 THTPAQ9BU02 230 aa15.51■□□□□ 0.07
VPS52-214ENST00000463486 GPR35Q9HC97 309 aa15.51■□□□□ 0.07
VPS52-214ENST00000463486 SLC17A5Q9NRA2 495 aa15.51■□□□□ 0.07
VPS52-214ENST00000463486 CIB4A0PJX0 185 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 ZNF587BE7ETH6 402 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 RNF13O43567 381 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 SERPINI2O75830 405 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 OR6A2O95222 327 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 PLAUP00749 431 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 UMPSP11172 480 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 ZNF26P17031 533 aaPredicted RBP15.5■□□□□ 0.07
VPS52-214ENST00000463486 MAGEA2P43356 314 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 LIMS1P48059 325 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 BIDP55957 195 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 ROR2Q01974 943 aaKnown RBP15.5■□□□□ 0.07
VPS52-214ENST00000463486 RUNX1T1Q06455 604 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 CAMK2DQ13557 499 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 PPA1Q15181 289 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 STK11Q15831 433 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 HIKESHIQ53FT3 197 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 MTX3Q5HYI7 312 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 NCMAPQ5T1S8 102 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 ZNF730Q6ZMV8 503 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 DHFR2Q86XF0 187 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 C17orf78Q8N4C9 275 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 TMEM54Q969K7 222 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 PLPPR2Q96GM1 343 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 SEPHS2Q99611 448 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 BTBD10Q9BSF8 475 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 FAM32AQ9Y421 112 aaKnown RBP15.5■□□□□ 0.07
VPS52-214ENST00000463486 VPS13CQ709C8 3753 aa15.5■□□□□ 0.07
VPS52-214ENST00000463486 CELSR1Q9NYQ6 3014 aa15.49■□□□□ 0.07
VPS52-214ENST00000463486 A0A1W2PR80 420 aa15.49■□□□□ 0.07
VPS52-214ENST00000463486 GYG2O15488 501 aa15.49■□□□□ 0.07
VPS52-214ENST00000463486 F13BP05160 661 aa15.49■□□□□ 0.07
VPS52-214ENST00000463486 ITGA2P17301 1181 aa15.49■□□□□ 0.07
VPS52-214ENST00000463486 OMPP47874 163 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms