RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 MALT1Q9UDY8 824 aa6.93□□□□□ -1.3
CDC42BPA-210ENST00000462553 A0A1W2PR80 420 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 ELOVL7A1L3X0 281 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 CPSF4LA6NMK7 179 aaKnown RBP6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 LRRN3E7EW58 273 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 CHP2O43745 196 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 SHOX2O60902 331 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 LY6HO94772 140 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 AHSA1O95433 338 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 BGLAPP02818 100 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 GPIP06744 558 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 PNMTP11086 282 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 PTAFRP25105 342 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 RPS5P46782 204 aaKnown RBP6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 GSK3BP49841 420 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 NUDT2P50583 147 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 ZNF83P51522 516 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 DSCR9P59020 149 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 NCALDP61601 193 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 LIPEQ05469 1076 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 LRRC23Q53EV4 343 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 CYBRD1Q53TN4 286 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 ENTPD8Q5MY95 495 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 LCE2CQ5TA81 110 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 FBXW9Q5XUX1 488 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 ZNF613Q6PF04 617 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 ULK3Q6PHR2 472 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 TMEM108Q6UXF1 575 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 SSX8Q7RTT4 187 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 ARPINQ7Z6K5 226 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 CPLX4Q7Z7G2 160 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 RANBP3LQ86VV4 465 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 CARM1Q86X55 608 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 ARIH2OSQ8N7S6 290 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 WDR31Q8NA23 367 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 OR2T12Q8NG77 320 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 MFSD8Q8NHS3 518 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 VANGL1Q8TAA9 524 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 ADAMTS16Q8TE57 1224 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 DNAJA4Q8WW22 397 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 TMEM45BQ96B21 275 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 MUCL1Q96DR8 90 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC47A1Q96FL8 570 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 RADILQ96JH8 1075 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 ZNF385AQ96PM9 386 aaKnown RBP6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 PRSS27Q9BQR3 290 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 NAA11Q9BSU3 229 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 TMEM43Q9BTV4 400 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 ZNF426Q9BUY5 554 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 C19orf24Q9BVV8 132 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 ARL8BQ9NVJ2 186 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 ADPRHL2Q9NX46 363 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 EMC3Q9P0I2 261 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 B3GAT1Q9P2W7 334 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 RPS6KB2Q9UBS0 482 aa6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 NOSIPQ9Y314 301 aaKnown RBP6.92□□□□□ -1.3
CDC42BPA-210ENST00000462553 WNK2Q9Y3S1 2297 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 TRAV36DV7A0A075B6V5 113 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC35F4A4IF30 521 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 VWC2LB2RUY7 222 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 M0R082 166 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 GPR171O14626 319 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 TRAF3IP2O43734 574 aaPredicted RBP6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 HPRP00739 348 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 FUT4P22083 530 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 GRPRP30550 384 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 KDELR2P33947 212 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 THBS2P35442 1172 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 PSME3P61289 254 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 LGALS3BPQ08380 585 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 GABRA6Q16445 453 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 FAM69AQ5T7M9 428 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 ZNF544Q6NX49 715 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC22A25Q6T423 547 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 C5orf46Q6UWT4 87 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 CASP12Q6UXS9 341 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 NHLRC1Q6VVB1 395 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 IL17RELQ6ZVW7 336 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 LINGO2Q7L985 606 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 VTCN1Q7Z7D3 282 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 EPHX4Q8IUS5 362 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 WDFY1Q8IWB7 410 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 ZNF100Q8IYN0 542 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 FBXL14Q8N1E6 418 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 KDM8Q8N371 416 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 ADPRHL1Q8NDY3 354 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 OR6S1Q8NH40 331 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 ZNF417Q8TAU3 575 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 RASSF5Q8WWW0 418 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 FAM168AQ92567 244 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 PROX1Q92786 737 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 APH1AQ96BI3 265 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 CMTM5Q96DZ9 223 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 SLC41A3Q96GZ6 507 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 MUS81Q96NY9 551 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 MOGAT1Q96PD6 335 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 CCT8L2Q96SF2 557 aa6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 ZNF587Q96SQ5 575 aaPredicted RBP6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 HOPXQ9BPY8 73 aaPredicted RBP6.91□□□□□ -1.3
CDC42BPA-210ENST00000462553 SF3B5Q9BWJ5 86 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms