RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 ZNF28P17035 718 aa18.28■□□□□ 0.52
CCM2-203ENST00000461377 OR10A3P58181 314 aa18.28■□□□□ 0.52
CCM2-203ENST00000461377 ASAH1Q13510 395 aa18.28■□□□□ 0.52
CCM2-203ENST00000461377 RIN1Q13671 783 aa18.28■□□□□ 0.52
CCM2-203ENST00000461377 SLC6A19Q695T7 634 aa18.28■□□□□ 0.52
CCM2-203ENST00000461377 EGFL6Q8IUX8 553 aa18.28■□□□□ 0.52
CCM2-203ENST00000461377 AGBL5Q8NDL9 886 aa18.28■□□□□ 0.52
CCM2-203ENST00000461377 ZNF519Q8TB69 540 aa18.28■□□□□ 0.52
CCM2-203ENST00000461377 RNF166Q96A37 237 aaPredicted RBP18.28■□□□□ 0.52
CCM2-203ENST00000461377 SNX18Q96RF0 628 aa18.28■□□□□ 0.52
CCM2-203ENST00000461377 SYT4Q9H2B2 425 aa18.28■□□□□ 0.52
CCM2-203ENST00000461377 PLPP3O14495 311 aa18.27■□□□□ 0.52
CCM2-203ENST00000461377 OR2T1O43869 369 aa18.27■□□□□ 0.52
CCM2-203ENST00000461377 GATBO75879 557 aaKnown RBP18.27■□□□□ 0.52
CCM2-203ENST00000461377 IGHMP01871 453 aa18.27■□□□□ 0.52
CCM2-203ENST00000461377 UCHL1P09936 223 aa18.27■□□□□ 0.52
CCM2-203ENST00000461377 APEX1P27695 318 aaKnown RBP18.27■□□□□ 0.52
CCM2-203ENST00000461377 RFX2P48378 723 aa18.27■□□□□ 0.52
CCM2-203ENST00000461377 RPL27P61353 136 aaKnown RBP18.27■□□□□ 0.52
CCM2-203ENST00000461377 ACKR1Q16570 336 aa18.27■□□□□ 0.52
CCM2-203ENST00000461377 UNQ9370/PRO34162Q6UXP9 181 aa18.27■□□□□ 0.52
CCM2-203ENST00000461377 KCTD20Q7Z5Y7 419 aa18.27■□□□□ 0.52
CCM2-203ENST00000461377 PM20D2Q8IYS1 436 aa18.27■□□□□ 0.52
CCM2-203ENST00000461377 NPAS1Q99742 590 aa18.27■□□□□ 0.52
CCM2-203ENST00000461377 GTPBP2Q9BX10 602 aaKnown RBP18.27■□□□□ 0.52
CCM2-203ENST00000461377 MYOTQ9UBF9 498 aa18.27■□□□□ 0.52
CCM2-203ENST00000461377 NXT1Q9UKK6 140 aaKnown RBP18.27■□□□□ 0.52
CCM2-203ENST00000461377 ASCC3Q8N3C0 2202 aaKnown RBP18.27■□□□□ 0.51
CCM2-203ENST00000461377 TVP23AA6NH52 213 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 FTCDNL1E5RQL4 147 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 SYPP08247 313 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 TAB1Q15750 504 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 NRARPQ7Z6K4 114 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 ITPKCQ96DU7 683 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 ADAD1Q96M93 576 aaKnown RBP18.26■□□□□ 0.51
CCM2-203ENST00000461377 UBL7Q96S82 380 aaPredicted RBP18.26■□□□□ 0.51
CCM2-203ENST00000461377 MNTQ99583 582 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 PDCD1LG2Q9BQ51 273 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 TXNIPQ9H3M7 391 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 MRPL39Q9NYK5 338 aaKnown RBP18.26■□□□□ 0.51
CCM2-203ENST00000461377 MED11Q9P086 117 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 FBXO4Q9UKT5 387 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 XKRYO14609 159 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 TRIM3O75382 744 aaPredicted RBP18.26■□□□□ 0.51
CCM2-203ENST00000461377 ARL6IP5O75915 188 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 PLGP00747 810 aaPredicted RBP18.26■□□□□ 0.51
CCM2-203ENST00000461377 ELK1P19419 428 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 APOBEC1P41238 236 aaKnown RBP18.26■□□□□ 0.51
CCM2-203ENST00000461377 TMED10P49755 219 aaKnown RBP18.26■□□□□ 0.51
CCM2-203ENST00000461377 CD300CQ08708 224 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 MADCAM1Q13477 382 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 P2RY14Q15391 338 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 TRILQ7L0X0 811 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 CELF2-AS1Q8N7Q2 184 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 ZNF417Q8TAU3 575 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 ZNF587Q96SQ5 575 aaPredicted RBP18.26■□□□□ 0.51
CCM2-203ENST00000461377 MFRPQ9BY79 579 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 MALT1Q9UDY8 824 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 MRM2Q9UI43 246 aaKnown RBP18.26■□□□□ 0.51
CCM2-203ENST00000461377 RASD1Q9Y272 281 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 HRH3Q9Y5N1 445 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 FKBP7Q9Y680 259 aa18.26■□□□□ 0.51
CCM2-203ENST00000461377 LOC102723996A0A087X1L8 192 aa18.25■□□□□ 0.51
CCM2-203ENST00000461377 PSMD9O00233 223 aa18.25■□□□□ 0.51
CCM2-203ENST00000461377 ETV2O00321 342 aaPredicted RBP18.25■□□□□ 0.51
CCM2-203ENST00000461377 SNPHO15079 494 aa18.25■□□□□ 0.51
CCM2-203ENST00000461377 AKR7A3O95154 331 aa18.25■□□□□ 0.51
CCM2-203ENST00000461377 ABHD16AO95870 558 aa18.25■□□□□ 0.51
CCM2-203ENST00000461377 HLA-DQB1P01920 261 aa18.25■□□□□ 0.51
CCM2-203ENST00000461377 FBXO45P0C2W1 286 aa18.25■□□□□ 0.51
CCM2-203ENST00000461377 RAB3BP20337 219 aa18.25■□□□□ 0.51
CCM2-203ENST00000461377 AHCYP23526 432 aa18.25■□□□□ 0.51
CCM2-203ENST00000461377 PTGDSP41222 190 aa18.25■□□□□ 0.51
CCM2-203ENST00000461377 NANOS3P60323 173 aaKnown RBP18.25■□□□□ 0.51
CCM2-203ENST00000461377 BICRALQ6AI39 1079 aa18.25■□□□□ 0.51
CCM2-203ENST00000461377 ARSKQ6UWY0 536 aa18.25■□□□□ 0.51
CCM2-203ENST00000461377 SPATC1Q76KD6 591 aa18.25■□□□□ 0.51
CCM2-203ENST00000461377 SLC22A8Q8TCC7 542 aa18.25■□□□□ 0.51
CCM2-203ENST00000461377 PHYHIPQ92561 330 aa18.25■□□□□ 0.51
CCM2-203ENST00000461377 TXNDC15Q96J42 360 aa18.25■□□□□ 0.51
CCM2-203ENST00000461377 KLHL15Q96M94 604 aa18.25■□□□□ 0.51
CCM2-203ENST00000461377 WDR76Q9H967 626 aa18.25■□□□□ 0.51
CCM2-203ENST00000461377 VSX1Q9NZR4 365 aaPredicted RBP18.25■□□□□ 0.51
CCM2-203ENST00000461377 KLRF1Q9NZS2 232 aa18.25■□□□□ 0.51
CCM2-203ENST00000461377 PRSS37A4D1T9 235 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 FAM25AB3EWG3 89 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 FAM25CB3EWG5 89 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 FAM25GB3EWG6 89 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 UPK3AO75631 287 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 OR2J2O76002 312 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 OR6A2O95222 327 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 TACSTD2P09758 323 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 OR8G3PP0DMU2 310 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 MC2RQ01718 297 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 IL18Q14116 193 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 PCOLCEQ15113 449 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 SLC25A35Q3KQZ1 300 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 FAM69BQ5VUD6 431 aa18.24■□□□□ 0.51
CCM2-203ENST00000461377 FAM199XQ6PEV8 388 aaPredicted RBP18.24■□□□□ 0.51
CCM2-203ENST00000461377 FAM198BQ6UWH4 519 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms