RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 REV1Q9UBZ9 1251 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 ZNF232Q9UNY5 417 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 GPR45Q9Y5Y3 372 aa12.51□□□□□ -0.41
DNMT3A-207ENST00000461228 TLDC2A0PJX2 215 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 M0R082 166 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 UBL3O95164 117 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 C1QCP02747 245 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 PRG2P13727 222 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 IDO1P14902 403 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 ETS2P15036 469 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 ANPEPP15144 967 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 PRKAR1BP31321 381 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 IFFO1Q0D2I5 559 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 CCNIQ14094 377 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 PCGF3Q3KNV8 242 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 NRN1LQ496H8 165 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 KRT80Q6KB66 452 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 H1FNTQ75WM6 255 aaPredicted RBP12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 C1QL2Q7Z5L3 287 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 DPPA2Q7Z7J5 298 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 C20orf196Q8IYI0 205 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 BBS10Q8TAM1 723 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 ZNF417Q8TAU3 575 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 TMEM19Q96HH6 336 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 ZNF587Q96SQ5 575 aaPredicted RBP12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 C1orf198Q9H425 327 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 A4GALTQ9NPC4 353 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 B3GAT2Q9NPZ5 323 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 G6PC2Q9NQR9 355 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 NKIRAS2Q9NYR9 191 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 KLHL14Q9P2G3 628 aa12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 TESQ9UGI8 421 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-207ENST00000461228 IGLV3-9A0A075B6K5 115 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 TRAV36DV7A0A075B6V5 113 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 SNAP29O95721 258 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 EPHA1P21709 976 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 IL12AP29459 219 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 RPS5P46782 204 aaKnown RBP12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 SLC1A6P48664 564 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 UFM1P61960 85 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 C1DQ13901 141 aaKnown RBP12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 TUSC1Q2TAM9 212 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 TRMT5Q32P41 509 aaKnown RBP12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 ZNF621Q6ZSS3 439 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 ZCCHC24Q8N2G6 241 aaKnown RBP12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 RAB39BQ96DA2 213 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 KTI12Q96EK9 354 aaPredicted RBP12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 PKNOX2Q96KN3 472 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 EPYCQ99645 322 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 SUCNR1Q9BXA5 334 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 C20orf27Q9GZN8 174 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 RAD21L1Q9H4I0 556 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 OCEL1Q9H607 264 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 RMND5AQ9H871 391 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 TPT1P8Q9HAU6 139 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 SLC52A3Q9NQ40 469 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 ZNF275Q9NSD4 429 aaPredicted RBP12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 ZNF224Q9NZL3 707 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 GPR160Q9UJ42 338 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 PCDHB10Q9UN67 800 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 NOX1Q9Y5S8 564 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 GMEB1Q9Y692 573 aa12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 PRKDCP78527 4128 aaKnown RBP12.49□□□□□ -0.41
DNMT3A-207ENST00000461228 IGKV1D-42A0A075B6H8 117 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 A0A0G2JMP0 313 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 A0A0X1KG70 313 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 SLC22A23A1A5C7 686 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 TRPC5OSA6NMA1 111 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 SDHDO14521 159 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 RAB36O95755 333 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 EGR1P18146 543 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 LSP1P33241 339 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 LMO4P61968 165 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 GALK2Q01415 458 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 MSMPQ1L6U9 139 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 UEVLDQ8IX04 471 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 CLIP4Q8N3C7 705 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 MREGQ8N565 214 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 C3orf56Q8N813 242 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 OR4M2Q8NGB6 313 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 PNPT1Q8TCS8 783 aaKnown RBP12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 ZNF837Q96EG3 531 aaPredicted RBP12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 MAELQ96JY0 434 aaKnown RBP12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 PPP1R36Q96LQ0 422 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 LRRC37BQ96QE4 947 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 FOXB1Q99853 325 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 TPK1Q9H3S4 243 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 ZMAT3Q9HA38 289 aaKnown RBP12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 SDR39U1Q9NRG7 319 aaPredicted RBP12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 MRPL39Q9NYK5 338 aaKnown RBP12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 ZIM2Q9NZV7 527 aa12.48□□□□□ -0.41
DNMT3A-207ENST00000461228 TGP01266 2768 aa12.47□□□□□ -0.41
DNMT3A-207ENST00000461228 A0A087WUJ7 227 aa12.47□□□□□ -0.41
DNMT3A-207ENST00000461228 HDAC3O15379 428 aa12.47□□□□□ -0.41
DNMT3A-207ENST00000461228 NCR1O76036 304 aa12.47□□□□□ -0.41
DNMT3A-207ENST00000461228 FSHBP01225 129 aa12.47□□□□□ -0.41
DNMT3A-207ENST00000461228 HPXP02790 462 aa12.47□□□□□ -0.41
DNMT3A-207ENST00000461228 ETFAP13804 333 aa12.47□□□□□ -0.41
DNMT3A-207ENST00000461228 CREB1P16220 341 aa12.47□□□□□ -0.41
DNMT3A-207ENST00000461228 GRPRP30550 384 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms