RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 NANSQ9NR45 359 aa14.18□□□□□ -0.14
CPSF6-203ENST00000456847 TRIM64A6NGJ6 449 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 TRIM64BA6NI03 449 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 SMAD7O15105 426 aaKnown RBP14.17□□□□□ -0.14
CPSF6-203ENST00000456847 HIST1H2ABP04908 130 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 KDELR2P33947 212 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 OR1E2P47887 323 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 NUDT2P50583 147 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 ZNF74Q16587 644 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 B3GLCTQ6Y288 498 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 HIST3H2AQ7L7L0 130 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 TMEM123Q8N131 208 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 OR6N1Q8NGY5 312 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 HIST1H2ACQ93077 130 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 SLC19A3Q9BZV2 496 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 CMTM6Q9NX76 183 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 USF3Q68DE3 2245 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 ARPC4-TTLL3A0A0A6YYG9 625 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 SLC35F4A4IF30 521 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 ATP6V1G2-DDX39BF2Z307 99 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 RPL36A-HNRNPH2H7BZ11 118 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 OVOL3O00110 214 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 GSTA4O15217 222 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 CAPZA2P47755 286 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 SEC24CP53992 1094 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 LIPEQ05469 1076 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 CAMK2DQ13557 499 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 NANOGNBQ7Z5D8 188 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 PXKQ7Z7A4 578 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 DTX2Q86UW9 622 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 ANKK1Q8NFD2 765 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 MAGEE2Q8TD90 523 aaPredicted RBP14.17□□□□□ -0.14
CPSF6-203ENST00000456847 LZICQ8WZA0 190 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 BOD1Q96IK1 185 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 TXNDC15Q96J42 360 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 HS6ST2Q96MM7 605 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 SLC38A2Q96QD8 506 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 POLR2J2Q9GZM3 115 aaKnown RBP14.17□□□□□ -0.14
CPSF6-203ENST00000456847 POLR2J3Q9H1A7 115 aaKnown RBP14.17□□□□□ -0.14
CPSF6-203ENST00000456847 EFCAB1Q9HAE3 211 aa14.17□□□□□ -0.14
CPSF6-203ENST00000456847 FLNAP21333 2647 aaKnown RBP14.16□□□□□ -0.14
CPSF6-203ENST00000456847 RNF13O43567 381 aa14.16□□□□□ -0.14
CPSF6-203ENST00000456847 SEC14L2O76054 403 aa14.16□□□□□ -0.14
CPSF6-203ENST00000456847 OR5F1O95221 314 aa14.16□□□□□ -0.14
CPSF6-203ENST00000456847 PAX7P23759 505 aa14.16□□□□□ -0.14
CPSF6-203ENST00000456847 TTKP33981 857 aa14.16□□□□□ -0.14
CPSF6-203ENST00000456847 SLC7A2P52569 658 aa14.16□□□□□ -0.14
CPSF6-203ENST00000456847 TREML1Q86YW5 311 aa14.16□□□□□ -0.14
CPSF6-203ENST00000456847 C20orf196Q8IYI0 205 aa14.16□□□□□ -0.14
CPSF6-203ENST00000456847 MUC15Q8N387 334 aa14.16□□□□□ -0.14
CPSF6-203ENST00000456847 COX4I2Q96KJ9 171 aa14.16□□□□□ -0.14
CPSF6-203ENST00000456847 SMR3AQ99954 134 aa14.16□□□□□ -0.14
CPSF6-203ENST00000456847 HOPXQ9BPY8 73 aaPredicted RBP14.16□□□□□ -0.14
CPSF6-203ENST00000456847 PRSS27Q9BQR3 290 aa14.16□□□□□ -0.14
CPSF6-203ENST00000456847 ULBP2Q9BZM5 246 aa14.16□□□□□ -0.14
CPSF6-203ENST00000456847 NELFAQ9H3P2 528 aa14.16□□□□□ -0.14
CPSF6-203ENST00000456847 GMPR2Q9P2T1 348 aaKnown RBP14.16□□□□□ -0.14
CPSF6-203ENST00000456847 RIMS3Q9UJD0 308 aa14.16□□□□□ -0.14
CPSF6-203ENST00000456847 ZNF229Q9UJW7 825 aa14.16□□□□□ -0.14
CPSF6-203ENST00000456847 MOKQ9UQ07 419 aa14.16□□□□□ -0.14
CPSF6-203ENST00000456847 IGHV1-18A0A0C4DH31 117 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 IFNGR1P15260 489 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 BIDP55957 195 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 PHYHD1Q5SRE7 291 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 CPLX4Q7Z7G2 160 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 SLC15A3Q8IY34 581 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 CIARTQ8N365 385 aaPredicted RBP14.15□□□□□ -0.14
CPSF6-203ENST00000456847 LRRC17Q8N6Y2 441 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 ZNF426Q9BUY5 554 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 CACNG6Q9BXT2 260 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 MOV10Q9HCE1 1003 aaKnown RBP14.15□□□□□ -0.14
CPSF6-203ENST00000456847 CBLN4Q9NTU7 201 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 POFUT2Q9Y2G5 429 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 ZNF99A8MXY4 864 aaPredicted RBP14.15□□□□□ -0.14
CPSF6-203ENST00000456847 ZNF682O95780 498 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 CD8AP01732 235 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 HOXB1P14653 301 aaPredicted RBP14.15□□□□□ -0.14
CPSF6-203ENST00000456847 IFNA8P32881 189 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 RBM34P42696 430 aaKnown RBP14.15□□□□□ -0.14
CPSF6-203ENST00000456847 CSNK1A1P48729 337 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 PIN1Q13526 163 aaPredicted RBP14.15□□□□□ -0.14
CPSF6-203ENST00000456847 ETFDHQ16134 617 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 CLEC12BQ2HXU8 276 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 ZNF544Q6NX49 715 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 CLEC9AQ6UXN8 241 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 SLC35D2Q76EJ3 337 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 NKAIN4Q8IVV8 208 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 PFN4Q8NHR9 129 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 TMEM255BQ8WV15 326 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 ZNF837Q96EG3 531 aaPredicted RBP14.15□□□□□ -0.14
CPSF6-203ENST00000456847 LRR1Q96L50 414 aa14.15□□□□□ -0.14
CPSF6-203ENST00000456847 ADAD1Q96M93 576 aaKnown RBP14.15□□□□□ -0.14
CPSF6-203ENST00000456847 ACANP16112 2415 aa14.14□□□□□ -0.15
CPSF6-203ENST00000456847 FAM171A2A8MVW0 826 aa14.14□□□□□ -0.15
CPSF6-203ENST00000456847 CXCR6O00574 342 aa14.14□□□□□ -0.15
CPSF6-203ENST00000456847 NME4O00746 187 aa14.14□□□□□ -0.15
CPSF6-203ENST00000456847 CRYAAP02489 173 aa14.14□□□□□ -0.15
CPSF6-203ENST00000456847 UGT2B15P54855 530 aa14.14□□□□□ -0.15
CPSF6-203ENST00000456847 SELENOWP63302 87 aa14.14□□□□□ -0.15
CPSF6-203ENST00000456847 MELKQ14680 651 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms