RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 F13BP05160 661 aa16.7■□□□□ 0.26
SEMA3B-209ENST00000456560 SRMP19623 302 aa16.7■□□□□ 0.26
SEMA3B-209ENST00000456560 GRPRP30550 384 aa16.7■□□□□ 0.26
SEMA3B-209ENST00000456560 OR1D5P58170 312 aa16.7■□□□□ 0.26
SEMA3B-209ENST00000456560 HSD11B2P80365 405 aa16.7■□□□□ 0.26
SEMA3B-209ENST00000456560 PITPNAQ00169 270 aa16.7■□□□□ 0.26
SEMA3B-209ENST00000456560 RPL18Q07020 188 aaKnown RBP16.7■□□□□ 0.26
SEMA3B-209ENST00000456560 EMC4Q5J8M3 183 aa16.7■□□□□ 0.26
SEMA3B-209ENST00000456560 SLC6A19Q695T7 634 aa16.7■□□□□ 0.26
SEMA3B-209ENST00000456560 OR1L3Q8NH93 324 aa16.7■□□□□ 0.26
SEMA3B-209ENST00000456560 MAFAQ8NHW3 353 aaPredicted RBP16.7■□□□□ 0.26
SEMA3B-209ENST00000456560 TAAR8Q969N4 342 aa16.7■□□□□ 0.26
SEMA3B-209ENST00000456560 KLHDC2Q9Y2U9 406 aa16.7■□□□□ 0.26
SEMA3B-209ENST00000456560 LEUTXA8MZ59 168 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 SRP9P49458 86 aaKnown RBP16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 DCAF7P61962 342 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 CFHR1Q03591 330 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 ZNF117Q03924 483 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 ANGPT1Q15389 498 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 FCN2Q15485 313 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 PRAMEF17Q5VTA0 474 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 BAIAP2L2Q6UXY1 529 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 KCTD20Q7Z5Y7 419 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 TIGD4Q8IY51 512 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 CARFQ8N187 725 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 ZNF563Q8TA94 476 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 HSD17B8Q92506 261 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 TSPAN32Q96QS1 320 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 SMAD5Q99717 465 aaKnown RBP16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 MED28Q9H204 178 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 B3GNT2Q9NY97 397 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 CLEC4AQ9UMR7 237 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 ING4Q9UNL4 249 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 IGHV1OR21-1A0A087WYE8 117 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 PSMD9O00233 223 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 DCTN6O00399 190 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 ZFPL1O95159 310 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 SLC6A8P48029 635 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 EBPQ15125 230 aaKnown RBP16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 NTRK2Q16620 822 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 BCL2L15Q5TBC7 163 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 ORAI1Q96D31 301 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 MAP6Q96JE9 813 aa16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 MRM2Q9UI43 246 aaKnown RBP16.69■□□□□ 0.26
SEMA3B-209ENST00000456560 A0A0C4DFX4 3053 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 MEN1O00255 615 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 TO15178 435 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 GSTZ1O43708 216 aaPredicted RBP16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 TSPAN2O60636 221 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 UPK3AO75631 287 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 PIAS2O75928 621 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 DGCR2P98153 550 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 MESTQ5EB52 335 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 WDR45BQ5MNZ6 344 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 CDC20BQ86Y33 519 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 C9orf40Q8IXQ3 194 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 SIX5Q8N196 739 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 LGALS14Q8TCE9 139 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 GAL3ST4Q96RP7 486 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 NRSN2Q9GZP1 204 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 FKRPQ9H9S5 495 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 SRA1Q9HD15 236 aaKnown RBP16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 GRHPRQ9UBQ7 328 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 COL5A1P20908 1838 aaPredicted RBP16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 NUP210LQ5VU65 1888 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 A0A1B0GTQ1 180 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 TMEM72A0PK05 275 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 ACOD1A6NK06 481 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 PDCD5O14737 125 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 CTDSPLO15194 276 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 ABHD16AO95870 558 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 BGLAPP02818 100 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 CD3GP09693 182 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 TACSTD2P09758 323 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 RPL6Q02878 288 aaKnown RBP16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 UBE2NLQ5JXB2 153 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 ESPNLQ6ZVH7 1005 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 KRT74Q7RTS7 529 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 SIAH3Q8IW03 269 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 D2HGDHQ8N465 521 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 ZNF431Q8TF32 576 aaPredicted RBP16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 ADAMTS14Q8WXS8 1223 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 ADAD1Q96M93 576 aaKnown RBP16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 DERL3Q96Q80 235 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 DHRS9Q9BPW9 319 aa16.68■□□□□ 0.26
SEMA3B-209ENST00000456560 A0A1W2PQD3 144 aa16.67■□□□□ 0.26
SEMA3B-209ENST00000456560 MAGEB1P43366 347 aa16.67■□□□□ 0.26
SEMA3B-209ENST00000456560 ZP2Q05996 745 aa16.67■□□□□ 0.26
SEMA3B-209ENST00000456560 TOMM34Q15785 309 aaPredicted RBP16.67■□□□□ 0.26
SEMA3B-209ENST00000456560 ZBTB37Q5TC79 503 aa16.67■□□□□ 0.26
SEMA3B-209ENST00000456560 GPR139Q6DWJ6 353 aa16.67■□□□□ 0.26
SEMA3B-209ENST00000456560 ZNF782Q6ZMW2 699 aaPredicted RBP16.67■□□□□ 0.26
SEMA3B-209ENST00000456560 MARCH3Q86UD3 253 aa16.67■□□□□ 0.26
SEMA3B-209ENST00000456560 BMPERQ8N8U9 685 aa16.67■□□□□ 0.26
SEMA3B-209ENST00000456560 ZFP3Q96NJ6 502 aa16.67■□□□□ 0.26
SEMA3B-209ENST00000456560 SEMA5BQ9P283 1151 aa16.67■□□□□ 0.26
SEMA3B-209ENST00000456560 ZNF222Q9UK12 451 aa16.67■□□□□ 0.26
SEMA3B-209ENST00000456560 A0A087WV48 116 aa16.66■□□□□ 0.26
SEMA3B-209ENST00000456560 CDC14CA4D256 554 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms