RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 RNF13O43567 381 aa6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 ZNF254O75437 659 aa6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 GATBO75879 557 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 DPP4P27487 766 aa6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 DCTDP32321 178 aa6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 AGFG1P52594 562 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 ZNF133P52736 654 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 GBX2P52951 348 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 RPS7P62081 194 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 ERVK-25P63136 954 aa6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 FOXF1Q12946 379 aa6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 TSTQ16762 297 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 THEM4Q5T1C6 240 aa6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 IL20RBQ6UXL0 311 aa6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 LSM14AQ8ND56 463 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 OR4K13Q8NH42 304 aa6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 AP3S1Q92572 193 aa6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 PNPLA2Q96AD5 504 aa6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 KCTD7Q96MP8 289 aa6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 OR5M11Q96RB7 305 aa6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 UTP23Q9BRU9 249 aaKnown RBP6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 RHNO1Q9BSD3 238 aa6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 MRI1Q9BV20 369 aa6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 DCSTAMPQ9H295 470 aa6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 TIGARQ9NQ88 270 aa6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 KLF13Q9Y2Y9 288 aaPredicted RBP6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 PEX16Q9Y5Y5 336 aa6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 EML6Q6ZMW3 1958 aa6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 WDFY4Q6ZS81 3184 aa6.16□□□□□ -1.42
ECHDC1-210ENST00000454859 TEX13CA0A0J9YWL9 993 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 A0A1W2PNU3 283 aaPredicted RBP6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 A0A1W2PPW3 197 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 AQP7P3A6NL99 342 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 M0R129 80 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 TMCC2O75069 709 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 AQP8O94778 261 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 GADD45AP24522 165 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 PTBP1P26599 531 aaKnown RBP eCLIP6.15□□□□□ -1.425e-10■■■■□ 20.2
ECHDC1-210ENST00000454859 ETV6P41212 452 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 CRYBB2P43320 205 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 GABREP78334 506 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 H3F3AP84243 136 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 TLE3Q04726 772 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 GLO1Q04760 184 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 FOXD4Q12950 439 aaPredicted RBP6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 DCTN2Q13561 401 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 ZNF846Q147U1 533 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 SSX1Q16384 188 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 PCK2Q16822 640 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 SLC35F1Q5T1Q4 408 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 LINC01590Q5TEZ4 76 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 LEG1Q6P5S2 330 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 TMPPEQ6ZT21 453 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 SLC35F2Q8IXU6 374 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 LRRC17Q8N6Y2 441 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 DEFB124Q8NES8 71 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 OR51G2Q8NGK0 314 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 OR6X1Q8NH79 312 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 POC1BQ8TC44 478 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 THAP3Q8WTV1 239 aaPredicted RBP6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 ASB10Q8WXI3 467 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 ACOT12Q8WYK0 555 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 PSMF1Q92530 271 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 BORCS5Q969J3 196 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 KCTD12Q96CX2 325 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 Q96M85 177 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 TSPAN32Q96QS1 320 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 WDR76Q9H967 626 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 PROK2Q9HC23 129 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 ZFP64Q9NPA5 681 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 ASCL3Q9NQ33 180 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 DKKL1Q9UK85 242 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 ZNF346Q9UL40 294 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 SF3B6Q9Y3B4 125 aaKnown RBP6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 CACNA1HO95180 2353 aa6.15□□□□□ -1.42
ECHDC1-210ENST00000454859 IQCMA0A1B0GVH7 501 aa6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 OR6C68A6NDL8 312 aa6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 OR6C65A6NJZ3 312 aa6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 NPIPA5E9PKD4 350 aa6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 KHDRBS3O75525 346 aaKnown RBP6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 SLC2A10O95528 541 aa6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 ZNF182P17025 639 aaPredicted RBP6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 PCSK6P29122 969 aa6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 CDKN2AP42771 156 aaKnown RBP6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 RORCP51449 518 aa6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 HSF1Q00613 529 aa6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 ZNF45Q02386 682 aa6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 ROM1Q03395 351 aa6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 Q0VFX4 171 aa6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 MYBPHQ13203 477 aa6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 KCNMB1Q16558 191 aa6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 ACKR1Q16570 336 aa6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 ZNF404Q494X3 552 aa6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 KLHL12Q53G59 568 aa6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 KCTD18Q6PI47 426 aaPredicted RBP6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 NHLRC1Q6VVB1 395 aa6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 ESPNLQ6ZVH7 1005 aa6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 VASH1Q7L8A9 365 aaPredicted RBP6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 CDC20BQ86Y33 519 aa6.15□□□□□ -1.43
ECHDC1-210ENST00000454859 TIGD4Q8IY51 512 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms