RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 GKAP1Q5VSY0 366 aaPredicted RBP5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ANXA8L1Q5VT79 327 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RNF220Q5VTB9 566 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 AP1ARQ63HQ0 302 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF813Q6ZN06 617 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MAVSQ7Z434 540 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF584Q8IVC4 421 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 NUDCD3Q8IVD9 361 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CMIPQ8IY22 773 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MIER2Q8N344 545 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 NATD1Q8N6N6 113 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 OR51F2Q8NH61 342 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 NEU4Q8WWR8 484 aaPredicted RBP5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PMM1Q92871 262 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TXNDC15Q96J42 360 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ANKRD27Q96NW4 1050 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 WFDC6Q9BQY6 131 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RACGAP1Q9H0H5 632 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 AIG1Q9NVV5 245 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 KLHL14Q9P2G3 628 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 DUSP13Q9UII6 198 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RCE1Q9Y256 329 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RASD1Q9Y272 281 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 GRIP1Q9Y3R0 1128 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CMAHPQ9Y471 501 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SPEF1Q9Y4P9 236 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PCDHB14Q9Y5E9 798 aa5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 V9GYY5 206 aaPredicted RBP5.13□□□□□ -1.59
HLA-DPA3-207ENST00000454398 IGHV3OR16-10A0A075B7F0 116 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ISPDA4D126 451 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 C11orf98E9PRG8 122 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 KPNA4O00629 521 aaPredicted RBP5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RFXANKO14593 260 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TMPRSS2O15393 492 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MPZL1O95297 269 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RAB36O95755 333 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 GUSBP08236 651 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 NUDT17P0C025 328 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TFPTP0C1Z6 253 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MYZAPP0CAP1 466 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 KITP10721 976 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MAKP20794 623 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ARR3P36575 388 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SERPINB5P36952 375 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SLC1A6P48664 564 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CRISP3P54108 245 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 LMO4P61968 165 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 LCN2P80188 198 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 BST1Q10588 318 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZP4Q12836 540 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TSTQ16762 297 aaKnown RBP5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 KRT71Q3SY84 523 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SPRNQ5BIV9 151 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF311Q5JNZ3 666 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 NXNQ6DKJ4 435 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SLC2A7Q6PXP3 512 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 JAZF1Q86VZ6 243 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 UEVLDQ8IX04 471 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF440Q8IYI8 595 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 C10orf53Q8N6V4 93 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TRIML2Q8N7C3 387 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SIGLECL1Q8N7X8 197 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZDHHC22Q8N966 263 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ANKRD42Q8N9B4 389 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PIK3C3Q8NEB9 887 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 VPS37AQ8NEZ2 397 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MFSD8Q8NHS3 518 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 NFKBIDQ8NI38 313 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MAGEE2Q8TD90 523 aaPredicted RBP5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MGARPQ8TDB4 240 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF418Q8TF45 676 aaPredicted RBP5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF75AQ96N20 296 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SH3GL3Q99963 347 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PAIP2Q9BPZ3 127 aaKnown RBP5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TMPRSS13Q9BYE2 586 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ULBP2Q9BZM5 246 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 LINC00470Q9BZP3 86 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 CENPHQ9H3R5 247 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 ZNF665Q9H7R5 613 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PPCSQ9HAB8 311 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MEAF6Q9HAF1 191 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 G6PC2Q9NQR9 355 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 B3GNT2Q9NY97 397 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 UBAP1Q9NZ09 502 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TAAR3PQ9P1P4 343 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 BTNL2Q9UIR0 455 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 FBXO9Q9UK97 447 aaPredicted RBP5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PCDHB10Q9UN67 800 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RAP2CQ9Y3L5 183 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 NOX1Q9Y5S8 564 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 SOX21Q9Y651 276 aaPredicted RBP5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 TANC2Q9HCD6 1990 aa5.12□□□□□ -1.59
HLA-DPA3-207ENST00000454398 A0A087WUJ7 227 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 MDFIC2A0A1B0GVS7 189 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 DNAJC9-AS1A6NH13 148 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 RPL36A-HNRNPH2H7BZ11 118 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 M0R3H8 397 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 AIM2O14862 343 aa5.11□□□□□ -1.59
HLA-DPA3-207ENST00000454398 PLPP2O43688 288 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms