RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 NPIPA1Q9UND3 350 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 GSTK1Q9Y2Q3 226 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 HEMK1Q9Y5R4 338 aaPredicted RBP7.07□□□□□ -1.28
BRCC3-208ENST00000453705 A0A1B0GUS0 222 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 E7ENX8 843 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 E9PLN8 166 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 TXNDC9O14530 226 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 APODP05090 189 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 HIST1H2AGP0C0S8 130 aaPredicted RBP7.07□□□□□ -1.28
BRCC3-208ENST00000453705 CDH1P12830 882 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 NELFEP18615 380 aaKnown RBP7.07□□□□□ -1.28
BRCC3-208ENST00000453705 HIST1H2ADP20671 130 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 KDELR2P33947 212 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 GNPDA1P46926 289 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 NUDT6P53370 316 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 KCNK10P57789 538 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 PFN3P60673 137 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 NDUFA9Q16795 377 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 ITPRIPL2Q3MIP1 535 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 ZNF562Q6V9R5 426 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 RFLNAQ6ZTI6 216 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 SEM1Q6ZVN7 128 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 RPS27LQ71UM5 84 aaKnown RBP7.07□□□□□ -1.28
BRCC3-208ENST00000453705 SSX9Q7RTT3 188 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 MRPL21Q7Z2W9 205 aaKnown RBP7.07□□□□□ -1.28
BRCC3-208ENST00000453705 GLB1L2Q8IW92 636 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 RIMKLAQ8IXN7 391 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 LAS2Q8IYD9 372 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 MUC20Q8N307 709 aaPredicted RBP7.07□□□□□ -1.28
BRCC3-208ENST00000453705 CLDN19Q8N6F1 224 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 VANGL1Q8TAA9 524 aaPredicted RBP7.07□□□□□ -1.28
BRCC3-208ENST00000453705 HIST1H2AHQ96KK5 128 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 MTERF1Q99551 399 aaKnown RBP7.07□□□□□ -1.28
BRCC3-208ENST00000453705 CMKLR1Q99788 373 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 HIST1H2AJQ99878 128 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 ATF6BQ99941 703 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 VKORC1Q9BQB6 163 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 H2AFJQ9BTM1 129 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 DGCR6LQ9BY27 220 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 PCBD2Q9H0N5 130 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 PIGUQ9H490 435 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 C1GALT1Q9NS00 363 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 ZNF701Q9NV72 531 aaPredicted RBP7.07□□□□□ -1.28
BRCC3-208ENST00000453705 NLKQ9UBE8 527 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 POU2F3Q9UKI9 436 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 SLCO1B1Q9Y6L6 691 aa7.07□□□□□ -1.28
BRCC3-208ENST00000453705 TRBV7-9A0A0J9YWB2 115 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 PRR33A8MZF0 331 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 BET1O15155 118 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 ITGA10O75578 1167 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 TCRBP04435 133 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 LCKP06239 509 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 LINC00032P0C843 101 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 CD1EP15812 388 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 LAP3P28838 519 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 KCNJ3P48549 501 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 CSNK1A1P48729 337 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 PLA2G16P53816 162 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 GNG2P59768 71 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 PITPNAQ00169 270 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 PRKCQQ04759 706 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 RNPS1Q15287 305 aaKnown RBP7.06□□□□□ -1.28
BRCC3-208ENST00000453705 SUSD6Q92537 303 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 EXOSC8Q96B26 276 aaKnown RBP7.06□□□□□ -1.28
BRCC3-208ENST00000453705 ISOC1Q96CN7 298 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 TRMT61AQ96FX7 289 aaKnown RBP7.06□□□□□ -1.28
BRCC3-208ENST00000453705 ZNF486Q96H40 463 aaPredicted RBP7.06□□□□□ -1.28
BRCC3-208ENST00000453705 MESP1Q9BRJ9 268 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 TIMM29Q9BSF4 260 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 ALX4Q9H161 411 aaPredicted RBP7.06□□□□□ -1.28
BRCC3-208ENST00000453705 ZNF430Q9H8G1 570 aaPredicted RBP7.06□□□□□ -1.28
BRCC3-208ENST00000453705 BEX1Q9HBH7 125 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 ZDHHC8Q9ULC8 765 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 ABCG2Q9UNQ0 655 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 BPTFQ12830 3046 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 TCRBV5S2A0A599 114 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 PRORSD1PA6NEY8 169 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 NME4O00746 187 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 SIAH2O43255 324 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 CD33P20138 364 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 PMCHP20382 165 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 IL12AP29459 219 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 NUDT1P36639 197 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 GPX4P36969 197 aaPredicted RBP7.06□□□□□ -1.28
BRCC3-208ENST00000453705 MS4A2Q01362 244 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 SLC17A1Q14916 467 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 ABRAXAS2Q15018 415 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 TAF13Q15543 124 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 LCTLQ6UWM7 567 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 QSOX2Q6ZRP7 698 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 LINC00299Q6ZSB3 139 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 GPR141Q7Z602 305 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 NOXA1Q86UR1 476 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 TMPRSS12Q86WS5 348 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 RALGPS2Q86X27 583 aaPredicted RBP7.06□□□□□ -1.28
BRCC3-208ENST00000453705 CALHM3Q86XJ0 350 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 GABRG1Q8N1C3 465 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 BHLHE22Q8NFJ8 381 aaPredicted RBP7.06□□□□□ -1.28
BRCC3-208ENST00000453705 FANCD2OSQ96PS1 177 aa7.06□□□□□ -1.28
BRCC3-208ENST00000453705 TNFRSF13CQ96RJ3 184 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms