RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 TPOP07202 933 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 GKN3PP0CG01 181 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 SLC6A1P30531 599 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 IFNGR2P38484 337 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 IL18Q14116 193 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 GINS1Q14691 196 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 CDONQ4KMG0 1287 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 PAQR6Q6TCH4 344 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 LRRC17Q8N6Y2 441 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 ARIH2OSQ8N7S6 290 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 OR52N1Q8NH53 320 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 RFKQ969G6 155 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 SLC38A2Q96QD8 506 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 WFDC6Q9BQY6 131 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 PRR14Q9BWN1 585 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 TRIM2Q9C040 744 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 METTL7AQ9H8H3 244 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 TMEM27Q9HBJ8 222 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 EXOSC3Q9NQT5 275 aaKnown RBP14.4□□□□□ -0.1
SNX17-204ENST00000453453 SDHAF3Q9NRP4 125 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 ZNF275Q9NSD4 429 aaPredicted RBP14.4□□□□□ -0.1
SNX17-204ENST00000453453 GLTPQ9NZD2 209 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 KLRF1Q9NZS2 232 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 SPEF1Q9Y4P9 236 aa14.4□□□□□ -0.1
SNX17-204ENST00000453453 CPSF4LA6NMK7 179 aaKnown RBP14.39□□□□□ -0.11
SNX17-204ENST00000453453 TLX2O43763 284 aaPredicted RBP14.39□□□□□ -0.11
SNX17-204ENST00000453453 EIF4E2O60573 245 aaKnown RBP14.39□□□□□ -0.11
SNX17-204ENST00000453453 OR5F1O95221 314 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 SOX14O95416 240 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 CD53P19397 219 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 SLC6A8P48029 635 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 ZNF136P52737 540 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 RAG2P55895 527 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 FABP5Q01469 135 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 TAGLNQ01995 201 aaKnown RBP14.39□□□□□ -0.11
SNX17-204ENST00000453453 ST3GAL3Q11203 375 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 PIN1Q13526 163 aaPredicted RBP14.39□□□□□ -0.11
SNX17-204ENST00000453453 ZNF791Q3KP31 576 aaPredicted RBP14.39□□□□□ -0.11
SNX17-204ENST00000453453 TOR2AQ5JU69 321 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 ACER2Q5QJU3 275 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 ABHD17BQ5VST6 288 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 FNDC7Q5VTL7 733 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 CD276Q5ZPR3 534 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 IL20RBQ6UXL0 311 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 MARCH3Q86UD3 253 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 IQCF2Q8IXL9 164 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 GPALPP1Q8IXQ4 340 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 FAM71CQ8NEG0 241 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 LRRC20Q8TCA0 184 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 RNFT2Q96EX2 444 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 LRR1Q96L50 414 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 OR2M2Q96R28 347 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 SECISBP2Q96T21 854 aaKnown RBP14.39□□□□□ -0.11
SNX17-204ENST00000453453 DPH1Q9BZG8 443 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 LAT2Q9GZY6 243 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 B3GAT2Q9NPZ5 323 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 MED17Q9NVC6 651 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 HPF1Q9NWY4 346 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 EMC3Q9P0I2 261 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 RHCGQ9UBD6 479 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 COMMD3Q9UBI1 195 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 RPS6KB2Q9UBS0 482 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 A4GNTQ9UNA3 340 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 WASF3Q9UPY6 502 aa14.39□□□□□ -0.11
SNX17-204ENST00000453453 A0A1B0GVI7 797 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 ARGFXA6NJG6 315 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 NKX2-8O15522 239 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 AKR7A2O43488 359 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 HPGDSO60760 199 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 PRKACBP22694 351 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 CASRP41180 1078 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 ID4P47928 161 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 MTNR1BP49286 362 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 CCR4P51679 360 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 CD226Q15762 336 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 PLA1AQ53H76 456 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 APOOLQ6UXV4 268 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 LRRC28Q86X40 367 aaPredicted RBP14.38□□□□□ -0.11
SNX17-204ENST00000453453 OR10G3Q8NGC4 313 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 GRHL3Q8TE85 626 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 SCMH1Q96GD3 660 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 MAP6Q96JE9 813 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 HDHD5Q9BXW7 423 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 MED28Q9H204 178 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 CTPS2Q9NRF8 586 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 COPZ2Q9P299 210 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 DOCK10Q96BY6 2186 aa14.38□□□□□ -0.11
SNX17-204ENST00000453453 TRAPPC13A5PLN9 417 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 KLK10O43240 276 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 HCRTR2O43614 444 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 CHP2O43745 196 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 RAF1P04049 648 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 PDGFAP04085 211 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 ANXA3P12429 323 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 PEPDP12955 493 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 PRG2P13727 222 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 STOMP27105 288 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 UQCRC1P31930 480 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 MTNR1AP48039 350 aa14.37□□□□□ -0.11
SNX17-204ENST00000453453 SKP2Q13309 424 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms