RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 LCN8Q6JVE9 175 aa17.56■□□□□ 0.4
COL9A3-202ENST00000452372 DHFR2Q86XF0 187 aa17.56■□□□□ 0.4
COL9A3-202ENST00000452372 ACOT11Q8WXI4 607 aaPredicted RBP17.56■□□□□ 0.4
COL9A3-202ENST00000452372 HSD17B8Q92506 261 aa17.56■□□□□ 0.4
COL9A3-202ENST00000452372 CLPTM1LQ96KA5 538 aa17.56■□□□□ 0.4
COL9A3-202ENST00000452372 BTBD10Q9BSF8 475 aa17.56■□□□□ 0.4
COL9A3-202ENST00000452372 A0A087WUU8 490 aa17.55■□□□□ 0.4
COL9A3-202ENST00000452372 A0A1W2PRQ8 180 aa17.55■□□□□ 0.4
COL9A3-202ENST00000452372 AKAP8O43823 692 aaKnown RBP17.55■□□□□ 0.4
COL9A3-202ENST00000452372 HRGP04196 525 aa17.55■□□□□ 0.4
COL9A3-202ENST00000452372 H1F0P07305 194 aaKnown RBP17.55■□□□□ 0.4
COL9A3-202ENST00000452372 ITGA5P08648 1049 aa17.55■□□□□ 0.4
COL9A3-202ENST00000452372 IFI30P13284 250 aa17.55■□□□□ 0.4
COL9A3-202ENST00000452372 PRKCDQ05655 676 aa17.55■□□□□ 0.4
COL9A3-202ENST00000452372 DGCR6Q14129 220 aa17.55■□□□□ 0.4
COL9A3-202ENST00000452372 TAB1Q15750 504 aa17.55■□□□□ 0.4
COL9A3-202ENST00000452372 NANOGNBQ7Z5D8 188 aa17.55■□□□□ 0.4
COL9A3-202ENST00000452372 ABHD12BQ7Z5M8 362 aaPredicted RBP17.55■□□□□ 0.4
COL9A3-202ENST00000452372 P2RY8Q86VZ1 359 aa17.55■□□□□ 0.4
COL9A3-202ENST00000452372 NRMQ8IXM6 262 aa17.55■□□□□ 0.4
COL9A3-202ENST00000452372 ANKK1Q8NFD2 765 aa17.55■□□□□ 0.4
COL9A3-202ENST00000452372 MCUR1Q96AQ8 359 aa17.55■□□□□ 0.4
COL9A3-202ENST00000452372 BPIFA2Q96DR5 249 aa17.55■□□□□ 0.4
COL9A3-202ENST00000452372 ASB9Q96DX5 294 aa17.55■□□□□ 0.4
COL9A3-202ENST00000452372 MUS81Q96NY9 551 aa17.55■□□□□ 0.4
COL9A3-202ENST00000452372 LINC00470Q9BZP3 86 aa17.55■□□□□ 0.4
COL9A3-202ENST00000452372 IL1RAPQ9NPH3 570 aa17.55■□□□□ 0.4
COL9A3-202ENST00000452372 TCRBV5S2A0A599 114 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 CIB4A0PJX0 185 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 DEFB108AA8MXU0 73 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 C11orf98E9PRG8 122 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 BLOC1S5-TXNDC5H3BN57 136 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 PIP5K1CO60331 668 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 SLC43A1O75387 559 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 UPK3AO75631 287 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 KRT33AO76009 404 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 DIRAS1O95057 198 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 TSPAN19P0C672 248 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 MPGP29372 298 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 TIMM23BQ5SRD1 257 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 OR7E24Q6IFN5 339 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 PGM2L1Q6PCE3 622 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 TBPL2Q6SJ96 375 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 ZNF730Q6ZMV8 503 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 MBOAT2Q6ZWT7 520 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 TMEM123Q8N131 208 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 SLC7A13Q8TCU3 470 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 TXNDC15Q96J42 360 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 DHRS1Q96LJ7 313 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 OR2M2Q96R28 347 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 PIP5K1AQ99755 562 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 MED29Q9NX70 200 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 PLEKHA6Q9Y2H5 1048 aa17.54■□□□□ 0.4
COL9A3-202ENST00000452372 SLC35F4A4IF30 521 aa17.53■□□□□ 0.4
COL9A3-202ENST00000452372 SIAH2O43255 324 aa17.53■□□□□ 0.4
COL9A3-202ENST00000452372 KLF4O43474 513 aa17.53■□□□□ 0.4
COL9A3-202ENST00000452372 RNF13O43567 381 aa17.53■□□□□ 0.4
COL9A3-202ENST00000452372 RAD51DO75771 328 aa17.53■□□□□ 0.4
COL9A3-202ENST00000452372 FABP3P05413 133 aa17.53■□□□□ 0.4
COL9A3-202ENST00000452372 MAKP20794 623 aa17.53■□□□□ 0.4
COL9A3-202ENST00000452372 TGFBR3Q03167 851 aa17.53■□□□□ 0.4
COL9A3-202ENST00000452372 RPL18Q07020 188 aaKnown RBP17.53■□□□□ 0.4
COL9A3-202ENST00000452372 LGALS3BPQ08380 585 aa17.53■□□□□ 0.4
COL9A3-202ENST00000452372 TRAP1Q12931 704 aaKnown RBP17.53■□□□□ 0.4
COL9A3-202ENST00000452372 GABRA6Q16445 453 aa17.53■□□□□ 0.4
COL9A3-202ENST00000452372 RRM2BQ7LG56 351 aa17.53■□□□□ 0.4
COL9A3-202ENST00000452372 SSX8Q7RTT4 187 aa17.53■□□□□ 0.4
COL9A3-202ENST00000452372 PIWIL3Q7Z3Z3 882 aaKnown RBP17.53■□□□□ 0.4
COL9A3-202ENST00000452372 WFDC8Q8IUA0 241 aa17.53■□□□□ 0.4
COL9A3-202ENST00000452372 POP5Q969H6 163 aaKnown RBP17.53■□□□□ 0.4
COL9A3-202ENST00000452372 EMC6Q9BV81 110 aa17.53■□□□□ 0.4
COL9A3-202ENST00000452372 PLEKHF2Q9H8W4 249 aa17.53■□□□□ 0.4
COL9A3-202ENST00000452372 OR5H1A6NKK0 313 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 ZNF726A6NNF4 738 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 ZNF587BE7ETH6 402 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 RPL36A-HNRNPH2H7BZ11 118 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 ACOT8O14734 319 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 SERPINI2O75830 405 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 ATP5HO75947 161 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 IFNGR1P15260 489 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 AQP2P41181 271 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 SMIM11AP58511 58 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 STK11Q15831 433 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 BEX5Q5H9J7 111 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 C9orf135Q5VTT2 229 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 FBXW10Q5XX13 1052 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 PODNL1Q6PEZ8 512 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 TMPRSS11FQ6ZWK6 438 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 SLC35D2Q76EJ3 337 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 LINGO2Q7L985 606 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 TGIF2LYQ8IUE0 185 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 ZDHHC21Q8IVQ6 265 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 CDK20Q8IZL9 346 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 C1orf162Q8NEQ5 155 aaPredicted RBP17.52■□□□□ 0.4
COL9A3-202ENST00000452372 CCDC124Q96CT7 223 aaKnown RBP17.52■□□□□ 0.4
COL9A3-202ENST00000452372 MUCL1Q96DR8 90 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 BOD1Q96IK1 185 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 LRR1Q96L50 414 aa17.52■□□□□ 0.4
COL9A3-202ENST00000452372 ADAD1Q96M93 576 aaKnown RBP17.52■□□□□ 0.4
COL9A3-202ENST00000452372 ZNF347Q96SE7 839 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms