RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, human

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGCE-208	ENST00000450385	NPTX1	Q15818	432 aa		13.98	□□□□□ -0.17
SGCE-208	ENST00000450385	HIKESHI	Q53FT3	197 aa		13.98	□□□□□ -0.17
SGCE-208	ENST00000450385	ENTPD8	Q5MY95	495 aa		13.98	□□□□□ -0.17
SGCE-208	ENST00000450385	NHLRC1	Q6VVB1	395 aa		13.98	□□□□□ -0.17
SGCE-208	ENST00000450385	CALHM3	Q86XJ0	350 aa		13.98	□□□□□ -0.17
SGCE-208	ENST00000450385	C20orf196	Q8IYI0	205 aa		13.98	□□□□□ -0.17
SGCE-208	ENST00000450385	OR10H5	Q8NGA6	315 aa		13.98	□□□□□ -0.17
SGCE-208	ENST00000450385	OR6T1	Q8NGN1	323 aa		13.98	□□□□□ -0.17
SGCE-208	ENST00000450385	ADAMTS16	Q8TE57	1224 aa		13.98	□□□□□ -0.17
SGCE-208	ENST00000450385	PROX1	Q92786	737 aa		13.98	□□□□□ -0.17
SGCE-208	ENST00000450385	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.98	□□□□□ -0.17
SGCE-208	ENST00000450385	ZNF426	Q9BUY5	554 aa		13.98	□□□□□ -0.17
SGCE-208	ENST00000450385	C1QTNF6	Q9BXI9	259 aa		13.98	□□□□□ -0.17
SGCE-208	ENST00000450385	CACNG6	Q9BXT2	260 aa		13.98	□□□□□ -0.17
SGCE-208	ENST00000450385	CRLF2	Q9HC73	371 aa		13.98	□□□□□ -0.17
SGCE-208	ENST00000450385	MED4	Q9NPJ6	270 aa		13.98	□□□□□ -0.17
SGCE-208	ENST00000450385	SAR1A	Q9NR31	198 aa		13.98	□□□□□ -0.17
SGCE-208	ENST00000450385	NANS	Q9NR45	359 aa		13.98	□□□□□ -0.17
SGCE-208	ENST00000450385	FBXL3	Q9UKT7	428 aa		13.98	□□□□□ -0.17
SGCE-208	ENST00000450385	IGHV1-18	A0A0C4DH31	117 aa		13.97	□□□□□ -0.17
SGCE-208	ENST00000450385	TLX2	O43763	284 aa	Predicted RBP	13.97	□□□□□ -0.17
SGCE-208	ENST00000450385	HIST1H2AB	P04908	130 aa		13.97	□□□□□ -0.17
SGCE-208	ENST00000450385	THRB	P10828	461 aa		13.97	□□□□□ -0.17
SGCE-208	ENST00000450385	CD247	P20963	164 aa		13.97	□□□□□ -0.17
SGCE-208	ENST00000450385	ACVR1B	P36896	505 aa		13.97	□□□□□ -0.17
SGCE-208	ENST00000450385	RBM34	P42696	430 aa	Known RBP	13.97	□□□□□ -0.17
SGCE-208	ENST00000450385	EFNA4	P52798	201 aa		13.97	□□□□□ -0.17
SGCE-208	ENST00000450385	KLF10	Q13118	480 aa		13.97	□□□□□ -0.17
SGCE-208	ENST00000450385	SWI5	Q1ZZU3	235 aa		13.97	□□□□□ -0.17
SGCE-208	ENST00000450385	CLEC2A	Q6UVW9	174 aa		13.97	□□□□□ -0.17
SGCE-208	ENST00000450385	HIST3H2A	Q7L7L0	130 aa		13.97	□□□□□ -0.17
SGCE-208	ENST00000450385	LINGO2	Q7L985	606 aa		13.97	□□□□□ -0.17
SGCE-208	ENST00000450385	NUP37	Q8NFH4	326 aa		13.97	□□□□□ -0.17
SGCE-208	ENST00000450385	GPR32P1	Q8NGA4	272 aa		13.97	□□□□□ -0.17
SGCE-208	ENST00000450385	HIST1H2AC	Q93077	130 aa		13.97	□□□□□ -0.17
SGCE-208	ENST00000450385	PRR14	Q9BWN1	585 aa		13.97	□□□□□ -0.17
SGCE-208	ENST00000450385	ZNF229	Q9UJW7	825 aa		13.97	□□□□□ -0.17
SGCE-208	ENST00000450385	USP22	Q9UPT9	525 aa		13.97	□□□□□ -0.17
SGCE-208	ENST00000450385	MOK	Q9UQ07	419 aa		13.97	□□□□□ -0.17
SGCE-208	ENST00000450385	FN1	P02751	2386 aa	Known RBP	13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	CENPBD1	B2RD01	187 aa		13.96	□□□□□ -0.17
SGCE-208	ENST00000450385		B9A039	149 aa		13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	F12	P00748	615 aa	Predicted RBP	13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	TP53	P04637	393 aa	Predicted RBP	13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	SLC25A16	P16260	332 aa		13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	SERPINF1	P36955	418 aa		13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	NUDT6	P53370	316 aa		13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	ARF1	P84077	181 aa	Known RBP	13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	NAAA	Q02083	359 aa		13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	SELPLG	Q14242	412 aa		13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	EFNB3	Q15768	340 aa		13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	CEACAM16	Q2WEN9	425 aa		13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	PIWIL3	Q7Z3Z3	882 aa	Known RBP	13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	HDDC2	Q7Z4H3	204 aa		13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	ARPIN	Q7Z6K5	226 aa		13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	C10orf53	Q8N6V4	93 aa		13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	OR6X1	Q8NH79	312 aa		13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	TAMM41	Q96BW9	452 aa		13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	ZNF442	Q9H7R0	627 aa		13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	FGFR1OP2	Q9NVK5	253 aa		13.96	□□□□□ -0.17
SGCE-208	ENST00000450385	YLPM1	P49750	1951 aa	Known RBP	13.96	□□□□□ -0.18
SGCE-208	ENST00000450385	CR1	P17927	2039 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	SLC35F4	A4IF30	521 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	RNF223	E7ERA6	249 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385		M0R3H8	397 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	NDUFAB1	O14561	156 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	MRAS	O14807	208 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	ATP8B1	O43520	1251 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	ADORA3	P0DMS8	318 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	IFNA8	P32881	189 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	SNRPD2	P62316	118 aa	Known RBP	13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	POU3F1	Q03052	451 aa	Predicted RBP	13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	SPOCK1	Q08629	439 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	ZNF74	Q16587	644 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	B3GLCT	Q6Y288	498 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	DPPA2	Q7Z7J5	298 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	RP9	Q8TA86	221 aa	Known RBP	13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	NANOS1	Q8WY41	292 aa	Known RBP	13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	ZNF583	Q96ND8	569 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	MOGAT1	Q96PD6	335 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	WFDC6	Q9BQY6	131 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	NELFA	Q9H3P2	528 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	CA10	Q9NS85	328 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	STX18	Q9P2W9	335 aa	Known RBP	13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	SEC14L4	Q9UDX3	406 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	POFUT2	Q9Y2G5	429 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	SPEF1	Q9Y4P9	236 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385	FKBP7	Q9Y680	259 aa		13.95	□□□□□ -0.18
SGCE-208	ENST00000450385		A0A096LPE4	126 aa		13.94	□□□□□ -0.18
SGCE-208	ENST00000450385		A0A1W2PPZ6	126 aa		13.94	□□□□□ -0.18
SGCE-208	ENST00000450385	CPSF4L	A6NMK7	179 aa	Known RBP	13.94	□□□□□ -0.18
SGCE-208	ENST00000450385	ATP6V1G2-DDX39B	F2Z307	99 aa		13.94	□□□□□ -0.18
SGCE-208	ENST00000450385	FXYD1	O00168	92 aa		13.94	□□□□□ -0.18
SGCE-208	ENST00000450385	NDUFS8	O00217	210 aa		13.94	□□□□□ -0.18
SGCE-208	ENST00000450385	SSX4	O60224	188 aa		13.94	□□□□□ -0.18
SGCE-208	ENST00000450385	CCDC22	O60826	627 aa		13.94	□□□□□ -0.18
SGCE-208	ENST00000450385	OR5F1	O95221	314 aa		13.94	□□□□□ -0.18
SGCE-208	ENST00000450385	HPR	P00739	348 aa		13.94	□□□□□ -0.18
SGCE-208	ENST00000450385	ASAH2B	P0C7U1	165 aa		13.94	□□□□□ -0.18

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