RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	PLPP3	O14495	311 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	GSTA4	O15217	222 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	SHOX2	O60902	331 aa	Predicted RBP	13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	LYPD3	O95274	346 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	THY1	P04216	161 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	HIST1H2AB	P04908	130 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	KDELR2	P33947	212 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	NUDT2	P50583	147 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	SEC24C	P53992	1094 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	TUBA1B	P68363	451 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	TUBA4A	P68366	448 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	ARF1	P84077	181 aa	Known RBP	13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	ZNF74	Q16587	644 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	CEACAM16	Q2WEN9	425 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	TUBA1A	Q71U36	451 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	HIST3H2A	Q7L7L0	130 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	NANOGNB	Q7Z5D8	188 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	PXK	Q7Z7A4	578 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	BIVM	Q86UB2	503 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	FBXL14	Q8N1E6	418 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	ANKK1	Q8NFD2	765 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	OR6N1	Q8NGY5	312 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	LZIC	Q8WZA0	190 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	BCL2L2	Q92843	193 aa	Predicted RBP	13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	HIST1H2AC	Q93077	130 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	HS6ST2	Q96MM7	605 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	DHRS9	Q9BPW9	319 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	EMC6	Q9BV81	110 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	POLR2J2	Q9GZM3	115 aa	Known RBP	13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	POLR2J3	Q9H1A7	115 aa	Known RBP	13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	EFCAB1	Q9HAE3	211 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	MOV10	Q9HCE1	1003 aa	Known RBP	13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	CMTM6	Q9NX76	183 aa		13.81	□□□□□ -0.2
HDLBP-223	ENST00000449864	CR1	P17927	2039 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	SLC35F4	A4IF30	521 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	TRIM64	A6NGJ6	449 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	TRIM64B	A6NI03	449 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	OVOL3	O00110	214 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	SEC14L2	O76054	403 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	OR5F1	O95221	314 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	PAX7	P23759	505 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	OR1E2	P47887	323 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	FABP6	P51161	128 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	SLC7A2	P52569	658 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	LIPE	Q05469	1076 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	CAMK2D	Q13557	499 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	B3GLCT	Q6Y288	498 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	CPLX4	Q7Z7G2	160 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	DTX2	Q86UW9	622 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	MAGEE2	Q8TD90	523 aa	Predicted RBP	13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	TXNDC15	Q96J42	360 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	SLC38A2	Q96QD8	506 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	ZNF426	Q9BUY5	554 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	ULBP2	Q9BZM5	246 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	NELFA	Q9H3P2	528 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	GSX1	Q9H4S2	264 aa	Predicted RBP	13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	RIMS3	Q9UJD0	308 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	ZNF229	Q9UJW7	825 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	MOK	Q9UQ07	419 aa		13.8	□□□□□ -0.2
HDLBP-223	ENST00000449864	ALPK2	Q86TB3	2170 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	IGHV1-18	A0A0C4DH31	117 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	ZNF99	A8MXY4	864 aa	Predicted RBP	13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	SMAD7	O15105	426 aa	Known RBP	13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	RNF13	O43567	381 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	ZNF682	O95780	498 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	CD8A	P01732	235 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	IFNGR1	P15260	489 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	IFNA8	P32881	189 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	TTK	P33981	857 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	RBM34	P42696	430 aa	Known RBP	13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	CAPZA2	P47755	286 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	BID	P55957	195 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	ETFDH	Q16134	617 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	PHYHD1	Q5SRE7	291 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	SLC35D2	Q76EJ3	337 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	TREML1	Q86YW5	311 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	SLC15A3	Q8IY34	581 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	C20orf196	Q8IYI0	205 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	MUC15	Q8N387	334 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	LRRC17	Q8N6Y2	441 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	CMTM5	Q96DZ9	223 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	COX4I2	Q96KJ9	171 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	SMR3A	Q99954	134 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	HOPX	Q9BPY8	73 aa	Predicted RBP	13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	PRSS27	Q9BQR3	290 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	ARFGEF3	Q5TH69	2177 aa		13.79	□□□□□ -0.2
HDLBP-223	ENST00000449864	FAM171A2	A8MVW0	826 aa		13.78	□□□□□ -0.2
HDLBP-223	ENST00000449864	CXCR6	O00574	342 aa		13.78	□□□□□ -0.2
HDLBP-223	ENST00000449864	NME4	O00746	187 aa		13.78	□□□□□ -0.2
HDLBP-223	ENST00000449864	NDUFAB1	O14561	156 aa		13.78	□□□□□ -0.2
HDLBP-223	ENST00000449864	CRYAA	P02489	173 aa		13.78	□□□□□ -0.2
HDLBP-223	ENST00000449864	MT-ND1	P03886	318 aa		13.78	□□□□□ -0.2
HDLBP-223	ENST00000449864	HOXB1	P14653	301 aa	Predicted RBP	13.78	□□□□□ -0.2
HDLBP-223	ENST00000449864	LSP1	P33241	339 aa		13.78	□□□□□ -0.2
HDLBP-223	ENST00000449864	CSNK1A1	P48729	337 aa		13.78	□□□□□ -0.2
HDLBP-223	ENST00000449864	SELENOW	P63302	87 aa		13.78	□□□□□ -0.2
HDLBP-223	ENST00000449864	PIN1	Q13526	163 aa	Predicted RBP	13.78	□□□□□ -0.2
HDLBP-223	ENST00000449864	CLEC12B	Q2HXU8	276 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms