RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 ANKRD28O15084 1053 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 FRS3O43559 492 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 PIP5K1CO60331 668 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 SNX3O60493 162 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 DNAJA2O60884 412 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 DCTN3O75935 186 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 OPN1MWP04001 364 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 OPN1MW2P0DN77 364 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 OPN1MW3P0DN78 364 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 KITP10721 976 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 LBPP18428 481 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 RPL3P39023 403 aaKnown RBP10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 MRPL19P49406 292 aaKnown RBP10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 AQP5P55064 265 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 CCL8P80075 99 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 FAM219BQ5XKK7 198 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 EPGNQ6UW88 154 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 SGCDQ92629 289 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 CDS1Q92903 461 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 ZNF385AQ96PM9 386 aaKnown RBP10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 OR11A1Q9GZK7 315 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 NPHS2Q9NP85 383 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 TCF7L2Q9NQB0 619 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 CTPS2Q9NRF8 586 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 NECAP2Q9NVZ3 263 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 UBAP1Q9NZ09 502 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 MYEF2Q9P2K5 600 aaKnown RBP10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 SEC14L4Q9UDX3 406 aa10.68□□□□□ -0.7
AC004540.1-204ENST00000449537 NOTCH3Q9UM47 2321 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 IGHV3OR16-10A0A075B7F0 116 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 A0A1W2PPW3 197 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 TRAF3IP2O43734 574 aaPredicted RBP10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 LINC00032P0C843 101 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 IDO1P14902 403 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 PROK1P58294 105 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 RPL38P63173 70 aaKnown RBP10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 EMX2Q04743 252 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 DOC2BQ14184 412 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 GSTA3Q16772 222 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 DPY19L1Q2PZI1 675 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 HFEQ30201 348 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 SPDYAQ5MJ70 313 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 FAM205BPQ63HN1 556 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 TMEM154Q6P9G4 183 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 PAQR6Q6TCH4 344 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 CCDC121Q6ZUS5 278 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 FNDC5Q8NAU1 212 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 OR9K2Q8NGE7 335 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 LINC01006Q8NI28 216 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 STACQ99469 402 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 CCDC106Q9BWC9 280 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 NELFAQ9H3P2 528 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 DUSP22Q9NRW4 184 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 FZR1Q9UM11 496 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 INSIG2Q9Y5U4 225 aa10.67□□□□□ -0.7
AC004540.1-204ENST00000449537 A0A0G2JND7 137 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 MDFIC2A0A1B0GVS7 189 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 AGAP5A6NIR3 686 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 TMEM229AB2RXF0 380 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 NPIPB9F8W1W9 429 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 TRAPPC2LH3BP13 241 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 SLC22A2O15244 555 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 DHHO43323 396 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 SEC22BO75396 215 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 ZNF12P17014 697 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 CCNA2P20248 432 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 CLNS1AP54105 237 aaKnown RBP10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 SH3BGRP55822 239 aaPredicted RBP10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 STX1BP61266 288 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 RPS23P62266 143 aaKnown RBP10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 KIAA0040Q15053 153 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 NKPD1Q17RQ9 610 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 TRMT5Q32P41 509 aaKnown RBP10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 PCGF3Q3KNV8 242 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 ALKBH6Q3KRA9 238 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 EXOSC6Q5RKV6 272 aaKnown RBP10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 C6orf136Q5SQH8 315 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 MAVSQ7Z434 540 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 PIGWQ7Z7B1 504 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 NATD1Q8N6N6 113 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 OR2T11Q8NH01 316 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 ZFP28Q8NHY6 868 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 MTERF3Q96E29 417 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 ALKBH3Q96Q83 286 aaPredicted RBP10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 SF3B5Q9BWJ5 86 aaKnown RBP10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 CHIAQ9BZP6 476 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 PIGUQ9H490 435 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 PIF1Q9H611 641 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 AKTIPQ9H8T0 292 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 FN3KRPQ9HA64 309 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 HINT3Q9NQE9 182 aaKnown RBP10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 SLC6A13Q9NSD5 602 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 AURKAIP1Q9NWT8 199 aaPredicted RBP10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 GPR160Q9UJ42 338 aa10.66□□□□□ -0.7
AC004540.1-204ENST00000449537 ISPDA4D126 451 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 C17orf100A8MU93 164 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 PDPK1O15530 556 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 TPD52L2O43399 206 aaKnown RBP10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 IGHV4-38-2P0DP08 117 aa10.65□□□□□ -0.7
AC004540.1-204ENST00000449537 BCKDHAP12694 445 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms