RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 SELENOPP49908 381 aa14.42□□□□□ -0.1
SF3A1-204ENST00000447376 SH3BGRP55822 239 aaPredicted RBP14.42□□□□□ -0.1
SF3A1-204ENST00000447376 VLDLRP98155 873 aa14.42□□□□□ -0.1
SF3A1-204ENST00000447376 ZNF74Q16587 644 aa14.42□□□□□ -0.1
SF3A1-204ENST00000447376 ZNF730Q6ZMV8 503 aa14.42□□□□□ -0.1
SF3A1-204ENST00000447376 PXKQ7Z7A4 578 aa14.42□□□□□ -0.1
SF3A1-204ENST00000447376 ZDHHC21Q8IVQ6 265 aa14.42□□□□□ -0.1
SF3A1-204ENST00000447376 AQP12AQ8IXF9 295 aa14.42□□□□□ -0.1
SF3A1-204ENST00000447376 CDK20Q8IZL9 346 aa14.42□□□□□ -0.1
SF3A1-204ENST00000447376 ANKK1Q8NFD2 765 aa14.42□□□□□ -0.1
SF3A1-204ENST00000447376 TMEM255BQ8WV15 326 aa14.42□□□□□ -0.1
SF3A1-204ENST00000447376 ACOT11Q8WXI4 607 aaPredicted RBP14.42□□□□□ -0.1
SF3A1-204ENST00000447376 NRGNQ92686 78 aa14.42□□□□□ -0.1
SF3A1-204ENST00000447376 SEPHS2Q99611 448 aa14.42□□□□□ -0.1
SF3A1-204ENST00000447376 LINC00470Q9BZP3 86 aa14.42□□□□□ -0.1
SF3A1-204ENST00000447376 PLEKHF2Q9H8W4 249 aa14.42□□□□□ -0.1
SF3A1-204ENST00000447376 UBTD1Q9HAC8 227 aa14.42□□□□□ -0.1
SF3A1-204ENST00000447376 RHCGQ9UBD6 479 aa14.42□□□□□ -0.1
SF3A1-204ENST00000447376 LRBAP50851 2863 aa14.42□□□□□ -0.1
SF3A1-204ENST00000447376 TACC2O95359 2948 aa14.42□□□□□ -0.1
SF3A1-204ENST00000447376 A0A1W2PRQ8 180 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 C11orf98E9PRG8 122 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 PLPP3O14495 311 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 ACOT8O14734 319 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 FFAR1O14842 300 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 KLF4O43474 513 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 SEMG1P04279 462 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 ITGA5P08648 1049 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 PAX7P23759 505 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 DGCR6Q14129 220 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 GABRA6Q16445 453 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 FGD3Q5JSP0 725 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 TMEM108Q6UXF1 575 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 ZNF704Q6ZNC4 412 aaPredicted RBP14.41□□□□□ -0.1
SF3A1-204ENST00000447376 C20orf204Q6ZNR8 217 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 C22orf34Q6ZV56 151 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 PIWIL3Q7Z3Z3 882 aaKnown RBP14.41□□□□□ -0.1
SF3A1-204ENST00000447376 HDDC2Q7Z4H3 204 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 LSRQ86X29 649 aaPredicted RBP14.41□□□□□ -0.1
SF3A1-204ENST00000447376 DEPDC4Q8N2C3 294 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 OR52N5Q8NH56 324 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 SGTBQ96EQ0 304 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 ADAD1Q96M93 576 aaKnown RBP14.41□□□□□ -0.1
SF3A1-204ENST00000447376 ALKBH3Q96Q83 286 aaPredicted RBP14.41□□□□□ -0.1
SF3A1-204ENST00000447376 MOV10Q9HCE1 1003 aaKnown RBP14.41□□□□□ -0.1
SF3A1-204ENST00000447376 KRCC1Q9NPI7 259 aaPredicted RBP14.41□□□□□ -0.1
SF3A1-204ENST00000447376 B3GAT1Q9P2W7 334 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 POMPQ9Y244 141 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 PLEKHA6Q9Y2H5 1048 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 RNF115Q9Y4L5 304 aa14.41□□□□□ -0.1
SF3A1-204ENST00000447376 A0A1W2PRG6 482 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 TCRBV5S2A0A599 114 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 LRRN3E7EW58 273 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 MS4A18H0YCH9 400 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 BLOC1S5-TXNDC5H3BN57 136 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 CLOCKO15516 846 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 CIB2O75838 187 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 PRSS23O95084 383 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 UGT2B15P54855 530 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 PRPS1P60891 318 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 UBE2NP61088 152 aaKnown RBP14.4□□□□□ -0.1
SF3A1-204ENST00000447376 ROR2Q01974 943 aaKnown RBP14.4□□□□□ -0.1
SF3A1-204ENST00000447376 LTBQ06643 244 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 MS4A18Q3C1V0 323 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 MBOAT2Q6ZWT7 520 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 SPATA24Q86W54 205 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 OR6N1Q8NGY5 312 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 MUS81Q96NY9 551 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 OBP2BQ9NPH6 170 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 MEPEQ9NQ76 525 aaPredicted RBP14.4□□□□□ -0.1
SF3A1-204ENST00000447376 CCM2LQ9NUG4 571 aaPredicted RBP14.4□□□□□ -0.1
SF3A1-204ENST00000447376 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.4□□□□□ -0.1
SF3A1-204ENST00000447376 SLC7A8Q9UHI5 535 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 TMCC3Q9ULS5 477 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 TMEM5Q9Y2B1 443 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 FREM1Q5H8C1 2179 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 CREBBPQ92793 2442 aa14.4□□□□□ -0.1
SF3A1-204ENST00000447376 DHRS12A0PJE2 317 aa14.39□□□□□ -0.11
SF3A1-204ENST00000447376 MCIDASD6RGH6 385 aa14.39□□□□□ -0.11
SF3A1-204ENST00000447376 PDLIM1O00151 329 aa14.39□□□□□ -0.11
SF3A1-204ENST00000447376 SIAH2O43255 324 aa14.39□□□□□ -0.11
SF3A1-204ENST00000447376 TRAF3IP2O43734 574 aaPredicted RBP14.39□□□□□ -0.11
SF3A1-204ENST00000447376 KRT36O76013 467 aa14.39□□□□□ -0.11
SF3A1-204ENST00000447376 OR7A10O76100 309 aa14.39□□□□□ -0.11
SF3A1-204ENST00000447376 DIRAS1O95057 198 aa14.39□□□□□ -0.11
SF3A1-204ENST00000447376 GADD45GO95257 159 aa14.39□□□□□ -0.11
SF3A1-204ENST00000447376 RAP2AP10114 183 aa14.39□□□□□ -0.11
SF3A1-204ENST00000447376 IFI30P13284 250 aa14.39□□□□□ -0.11
SF3A1-204ENST00000447376 FUT1P19526 365 aa14.39□□□□□ -0.11
SF3A1-204ENST00000447376 ART1P52961 327 aa14.39□□□□□ -0.11
SF3A1-204ENST00000447376 IST1P53990 364 aa14.39□□□□□ -0.11
SF3A1-204ENST00000447376 SPIBQ01892 262 aa14.39□□□□□ -0.11
SF3A1-204ENST00000447376 ZP4Q12836 540 aa14.39□□□□□ -0.11
SF3A1-204ENST00000447376 TAF11Q15544 211 aa14.39□□□□□ -0.11
SF3A1-204ENST00000447376 ACKR1Q16570 336 aa14.39□□□□□ -0.11
SF3A1-204ENST00000447376 NCMAPQ5T1S8 102 aa14.39□□□□□ -0.11
SF3A1-204ENST00000447376 CARD17Q5XLA6 110 aa14.39□□□□□ -0.11
SF3A1-204ENST00000447376 TSEN54Q7Z6J9 526 aaKnown RBP14.39□□□□□ -0.11
SF3A1-204ENST00000447376 PFN4Q8NHR9 129 aa14.39□□□□□ -0.11
SF3A1-204ENST00000447376 PIGTQ969N2 578 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms