RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 DUX4L2P0CJ85 424 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 DUX4L3P0CJ86 424 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 DUX4L5P0CJ88 424 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 DUX4L6P0CJ89 424 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 DUX4L7P0CJ90 424 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 OR12D1P0DN82 309 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 UROSP10746 265 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 NCF1P14598 390 aaPredicted RBP2.65□□□□□ -1.98
PMS1-215ENST00000447232 ZNF250P15622 560 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 CFHR2P36980 270 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 MAP3K8P41279 467 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 FOXA1P55317 472 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 HNRNPA0Q13151 305 aaKnown RBP2.65□□□□□ -1.98
PMS1-215ENST00000447232 RAB39AQ14964 217 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 ATP6AP1LQ52LC2 224 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 SYT14P1Q58G82 188 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 STEAP4Q687X5 459 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 DUX4L9Q6RFH8 374 aaPredicted RBP2.65□□□□□ -1.98
PMS1-215ENST00000447232 ZNF662Q6ZS27 426 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 CALHM3Q86XJ0 350 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 DDIASQ8IXT1 998 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 TM4SF18Q96CE8 201 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 LRRC39Q96DD0 335 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 ITCHQ96J02 903 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 ATOH8Q96SQ7 321 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 NUDT16L1Q9BRJ7 211 aaKnown RBP2.65□□□□□ -1.98
PMS1-215ENST00000447232 TSGA10Q9BZW7 698 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 NMUR2Q9GZQ4 415 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 B3GNT2Q9NY97 397 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 PAK5Q9P286 719 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 DUX4Q9UBX2 424 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 PSME2Q9UL46 239 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 ZNF780BQ9Y6R6 833 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 VPS13DQ5THJ4 4388 aa2.65□□□□□ -1.98
PMS1-215ENST00000447232 NUP214P35658 2090 aaPredicted RBP2.65□□□□□ -1.99
PMS1-215ENST00000447232 TCRBV7S2A1N4TA0A589 114 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 AQP7P3A6NL99 342 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 CEACAM18A8MTB9 384 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 ZNF587BE7ETH6 402 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 H0YIV9 168 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 PF4V1P10720 104 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 SLC6A2P23975 617 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 EPHA3P29320 983 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 P2RX1P51575 399 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 SH3BGRP55822 239 aaPredicted RBP2.65□□□□□ -1.99
PMS1-215ENST00000447232 GNB2P62879 340 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 ZMYND11Q15326 602 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 CCNG2Q16589 344 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 TSTQ16762 297 aaKnown RBP2.65□□□□□ -1.99
PMS1-215ENST00000447232 HSP90AA5PQ58FG0 334 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 TTMPQ5BVD1 217 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 SULT1C3Q6IMI6 304 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 GALNT7Q86SF2 657 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 ZBED8Q8IZ13 594 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 RPP25LQ8N5L8 163 aaKnown RBP2.65□□□□□ -1.99
PMS1-215ENST00000447232 PDPRQ8NCN5 879 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 OR4C13Q8NGP0 309 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 OR5R1Q8NH85 324 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 SNX33Q8WV41 574 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 C10orf82Q8WW14 230 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 TFAP2CQ92754 450 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 ZHX1-C8orf76Q96EF9 292 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 AURKBQ96GD4 344 aaPredicted RBP2.65□□□□□ -1.99
PMS1-215ENST00000447232 ALKBH3Q96Q83 286 aaPredicted RBP2.65□□□□□ -1.99
PMS1-215ENST00000447232 SIGLEC11Q96RL6 698 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 MNTQ99583 582 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 C20orf96Q9NUD7 363 aaPredicted RBP2.65□□□□□ -1.99
PMS1-215ENST00000447232 SLCO1C1Q9NYB5 712 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 C19orf53Q9UNZ5 99 aaPredicted RBP2.65□□□□□ -1.99
PMS1-215ENST00000447232 CHST2Q9Y4C5 530 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 NOX1Q9Y5S8 564 aa2.65□□□□□ -1.99
PMS1-215ENST00000447232 TCRBV7S3A2A0A539 114 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 SLC22A23A1A5C7 686 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 MAGEB16A2A368 324 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 BTBD17A6NE02 478 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 RPL36A-HNRNPH2H7BZ11 118 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 UPK1AO00322 258 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 TPD52L2O43399 206 aaKnown RBP2.64□□□□□ -1.99
PMS1-215ENST00000447232 FAM20BO75063 409 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 GUCY1B2O75343 617 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 IGHV1-46P01743 117 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 JUNP05412 331 aaKnown RBP2.64□□□□□ -1.99
PMS1-215ENST00000447232 ZSCAN5DPP0CG00 497 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 LCN1P31025 176 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 MAPK12P53778 367 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 RWDD2BP57060 319 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 KLF3P57682 345 aaPredicted RBP2.64□□□□□ -1.99
PMS1-215ENST00000447232 BTG1P62324 171 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 CDK16Q00536 496 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 TIGD2Q4W5G0 525 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 SPRNQ5BIV9 151 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 RABL3Q5HYI8 236 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 CCNYL2Q5T2Q4 361 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 FRA10AC1Q70Z53 315 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 AAED1Q7RTV5 226 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 MTERF4Q7Z6M4 381 aaKnown RBP2.64□□□□□ -1.99
PMS1-215ENST00000447232 VSTM4Q8IW00 320 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 Q8N2B8 174 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 OR2L13Q8N349 312 aa2.64□□□□□ -1.99
PMS1-215ENST00000447232 ZNF283Q8N7M2 679 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms