RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 EFNB3Q15768 340 aa15.78■□□□□ 0.12
COL9A1-205ENST00000447041 CARTPTQ16568 116 aa15.78■□□□□ 0.12
COL9A1-205ENST00000447041 PODNL1Q6PEZ8 512 aa15.78■□□□□ 0.12
COL9A1-205ENST00000447041 DHDDSQ86SQ9 333 aa15.78■□□□□ 0.12
COL9A1-205ENST00000447041 MDP1Q86V88 176 aa15.78■□□□□ 0.12
COL9A1-205ENST00000447041 RANBP3LQ86VV4 465 aaPredicted RBP15.78■□□□□ 0.12
COL9A1-205ENST00000447041 NUP37Q8NFH4 326 aa15.78■□□□□ 0.12
COL9A1-205ENST00000447041 OR4F15Q8NGB8 312 aa15.78■□□□□ 0.12
COL9A1-205ENST00000447041 OR6S1Q8NH40 331 aa15.78■□□□□ 0.12
COL9A1-205ENST00000447041 EPYCQ99645 322 aa15.78■□□□□ 0.12
COL9A1-205ENST00000447041 PIMREGQ9BSJ6 248 aa15.78■□□□□ 0.12
COL9A1-205ENST00000447041 PLK3Q9H4B4 646 aa15.78■□□□□ 0.12
COL9A1-205ENST00000447041 MOV10Q9HCE1 1003 aaKnown RBP15.78■□□□□ 0.12
COL9A1-205ENST00000447041 MED29Q9NX70 200 aa15.78■□□□□ 0.12
COL9A1-205ENST00000447041 LEF1Q9UJU2 399 aaPredicted RBP15.78■□□□□ 0.12
COL9A1-205ENST00000447041 SLC13A4Q9UKG4 626 aa15.78■□□□□ 0.12
COL9A1-205ENST00000447041 CORINQ9Y5Q5 1042 aa15.78■□□□□ 0.12
COL9A1-205ENST00000447041 IGHV2OR16-5A0A0B4J2B6 119 aa15.77■□□□□ 0.12
COL9A1-205ENST00000447041 SERPINB7O75635 380 aa15.77■□□□□ 0.12
COL9A1-205ENST00000447041 IFNA2P01563 188 aa15.77■□□□□ 0.12
COL9A1-205ENST00000447041 THBS4P35443 961 aa15.77■□□□□ 0.12
COL9A1-205ENST00000447041 NR4A2P43354 598 aa15.77■□□□□ 0.12
COL9A1-205ENST00000447041 PCBP3P57721 371 aaKnown RBP15.77■□□□□ 0.12
COL9A1-205ENST00000447041 MTPNP58546 118 aa15.77■□□□□ 0.12
COL9A1-205ENST00000447041 LSM11P83369 360 aaKnown RBP eCLIP15.77■□□□□ 0.12
COL9A1-205ENST00000447041 MFSD13AQ14CX5 517 aa15.77■□□□□ 0.12
COL9A1-205ENST00000447041 CYB5R2Q6BCY4 276 aa15.77■□□□□ 0.12
COL9A1-205ENST00000447041 RETREG3Q86VR2 466 aa15.77■□□□□ 0.12
COL9A1-205ENST00000447041 C20orf196Q8IYI0 205 aa15.77■□□□□ 0.12
COL9A1-205ENST00000447041 SCAIQ8N9R8 606 aa15.77■□□□□ 0.12
COL9A1-205ENST00000447041 BHLHE22Q8NFJ8 381 aaPredicted RBP15.77■□□□□ 0.12
COL9A1-205ENST00000447041 SPATA3Q8NHX4 192 aa15.77■□□□□ 0.12
COL9A1-205ENST00000447041 TXNDC15Q96J42 360 aa15.77■□□□□ 0.12
COL9A1-205ENST00000447041 KCNK17Q96T54 332 aa15.77■□□□□ 0.12
COL9A1-205ENST00000447041 ASPNQ9BXN1 380 aa15.77■□□□□ 0.12
COL9A1-205ENST00000447041 ZNF385DQ9H6B1 395 aa15.77■□□□□ 0.12
COL9A1-205ENST00000447041 NOX3Q9HBY0 568 aa15.77■□□□□ 0.12
COL9A1-205ENST00000447041 SLC35F4A4IF30 521 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 hCG_2039718K7EN88 272 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 NDUFS8O00217 210 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 SERPINI2O75830 405 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 ARR3P36575 388 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 PPOXP50336 477 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 PUDPQ08623 228 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 PMS2P3Q13401 168 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 NPTX1Q15818 432 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 DUSP7Q16829 419 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 CYP51A1Q16850 503 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 NHLRC1Q6VVB1 395 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 SVOPLQ8N434 492 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 C10orf53Q8N6V4 93 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 C11orf65Q8NCR3 313 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 GPR32P1Q8NGA4 272 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 ANKRD27Q96NW4 1050 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 MCHR1Q99705 422 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 ARHGDIGQ99819 225 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 TMEM43Q9BTV4 400 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 ZNF442Q9H7R0 627 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 INTS9Q9NV88 658 aaKnown RBP15.76■□□□□ 0.11
COL9A1-205ENST00000447041 MRPL39Q9NYK5 338 aaKnown RBP15.76■□□□□ 0.11
COL9A1-205ENST00000447041 CDC42EP3Q9UKI2 254 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 ATRQ13535 2644 aa15.76■□□□□ 0.11
COL9A1-205ENST00000447041 IGHV4-61A0A0C4DH41 118 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 RNF212BA8MTL3 300 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 HLA-HP01893 362 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 FAM157CP0CG43 387 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 CAMK2DQ13557 499 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 SWT1Q5T5J6 900 aaKnown RBP15.75■□□□□ 0.11
COL9A1-205ENST00000447041 KRT80Q6KB66 452 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 WDR88Q6ZMY6 472 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 SPATA21Q7Z572 469 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 ZCCHC24Q8N2G6 241 aaKnown RBP15.75■□□□□ 0.11
COL9A1-205ENST00000447041 ARIH2OSQ8N7S6 290 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 OR4D11Q8NGI4 311 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 OR6T1Q8NGN1 323 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 CKAP2Q8WWK9 683 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 MS4A3Q96HJ5 214 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 FOXN4Q96NZ1 517 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 CGREF1Q99674 301 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 RABEP2Q9H5N1 569 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 MYOZ1Q9NP98 299 aaPredicted RBP15.75■□□□□ 0.11
COL9A1-205ENST00000447041 TMEM160Q9NX00 188 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 USP22Q9UPT9 525 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 NDUFAF1Q9Y375 327 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 NOX1Q9Y5S8 564 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 RTTNQ86VV8 2226 aa15.75■□□□□ 0.11
COL9A1-205ENST00000447041 LOC390937A0A1W2PQ73 354 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 CPSF4LA6NMK7 179 aaKnown RBP15.74■□□□□ 0.11
COL9A1-205ENST00000447041 M0QX08 132 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 PLPP3O14495 311 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 ANGPT2O15123 496 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 CHP2O43745 196 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 THY1P04216 161 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 B4GALT1P15291 398 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 NPR2P20594 1047 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 AHCYP23526 432 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 IGFBP5P24593 272 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 SNTB2Q13425 540 aaKnown RBP15.74■□□□□ 0.11
COL9A1-205ENST00000447041 ENTPD8Q5MY95 495 aa15.74■□□□□ 0.11
COL9A1-205ENST00000447041 ZNF613Q6PF04 617 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms