RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 TMED10P49755 219 aaKnown RBP15.76■□□□□ 0.11
SMC6-206ENST00000446852 GBX2P52951 348 aaPredicted RBP15.76■□□□□ 0.11
SMC6-206ENST00000446852 SUMO3P55854 103 aaPredicted RBP15.76■□□□□ 0.11
SMC6-206ENST00000446852 ACKR1Q16570 336 aa15.76■□□□□ 0.11
SMC6-206ENST00000446852 DBX2Q6ZNG2 339 aa15.76■□□□□ 0.11
SMC6-206ENST00000446852 TIGD4Q8IY51 512 aa15.76■□□□□ 0.11
SMC6-206ENST00000446852 PM20D2Q8IYS1 436 aa15.76■□□□□ 0.11
SMC6-206ENST00000446852 IGHV1-45A0A0A0MS14 117 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 TVP23AA6NH52 213 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 SHISA8B8ZZ34 492 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 GDI2P50395 445 aaKnown RBP15.75■□□□□ 0.11
SMC6-206ENST00000446852 FOXF1Q12946 379 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 ZNF528Q3MIS6 628 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 ZNF684Q5T5D7 378 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 EEF1A1P5Q5VTE0 462 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 SLC16A9Q7RTY1 509 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 GALNT6Q8NCL4 622 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 OR2T4Q8NH00 348 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 SLC22A8Q8TCC7 542 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 RHBDD1Q8TEB9 315 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 THAP4Q8WY91 577 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 DIRAS2Q96HU8 199 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 ARL5BQ96KC2 179 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 SLC39A1Q9NY26 324 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 LNP1A1A4G5 178 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 PLPP3O14495 311 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 GPANK1O95872 356 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 RENP00797 406 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 HSF2Q03933 536 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 INPP5JQ15735 1006 aaPredicted RBP15.75■□□□□ 0.11
SMC6-206ENST00000446852 NTRK2Q16620 822 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 ACSM3Q53FZ2 586 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 FAM131AQ6UXB0 335 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 ZNF519Q8TB69 540 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 HTRA1Q92743 480 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 RNF166Q96A37 237 aaPredicted RBP15.75■□□□□ 0.11
SMC6-206ENST00000446852 SP140LQ9H930 580 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 PPP4R1LQ9P1A2 415 aa15.75■□□□□ 0.11
SMC6-206ENST00000446852 C9J4A7 227 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 HPGDSO60760 199 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 ZNF883P0CG24 379 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 COX6A1P12074 109 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 CCKBRP32239 447 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 DLX5P56178 289 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 BAK1Q16611 211 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 OR8H2Q8N162 312 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 SPACA9Q96E40 222 aaPredicted RBP15.74■□□□□ 0.11
SMC6-206ENST00000446852 METTL7AQ9H8H3 244 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 WIF1Q9Y5W5 379 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 HS3ST3B1Q9Y662 390 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 AKR7A3O95154 331 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 SPNP16150 400 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 RPL27P61353 136 aaKnown RBP15.74■□□□□ 0.11
SMC6-206ENST00000446852 RPS11P62280 158 aaKnown RBP eCLIP15.74■□□□□ 0.11
SMC6-206ENST00000446852 MADCAM1Q13477 382 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 ANGPT1Q15389 498 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 RPL22L1Q6P5R6 122 aaKnown RBP15.74■□□□□ 0.11
SMC6-206ENST00000446852 C5orf46Q6UWT4 87 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 ZNF554Q86TJ5 538 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 MS4A15Q8N5U1 240 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 IMMP1LQ96LU5 166 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 PDCD1LG2Q9BQ51 273 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 MRPL39Q9NYK5 338 aaKnown RBP15.74■□□□□ 0.11
SMC6-206ENST00000446852 B3GALT1Q9Y5Z6 326 aa15.74■□□□□ 0.11
SMC6-206ENST00000446852 CACNA1CQ13936 2221 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 TRBV2A0A0J9YWF9 115 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 FABP12A6NFH5 140 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 ETV2O00321 342 aaPredicted RBP15.73■□□□□ 0.11
SMC6-206ENST00000446852 OR2T1O43869 369 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 FREM3P0C091 2139 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 PSKH1P11801 424 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 EDNRAP25101 427 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 APOBEC1P41238 236 aaKnown RBP15.73■□□□□ 0.11
SMC6-206ENST00000446852 OR10A3P58181 314 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 PPP3R1P63098 170 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 CDC20Q12834 499 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 CDC20BQ86Y33 519 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 KDM8Q8N371 416 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 ZNF700Q9H0M5 742 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 TXNIPQ9H3M7 391 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 WDR76Q9H967 626 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 TIGARQ9NQ88 270 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 TBC1D24Q9ULP9 559 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 IGLV3-32A0A0A0MS00 114 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 XKRYO14609 159 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 EFNA2O43921 213 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 ITGA10O75578 1167 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 PTTG1O95997 202 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 HLA-DOBP13765 273 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 CASP3P42574 277 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 RPS27P42677 84 aaKnown RBP15.73■□□□□ 0.11
SMC6-206ENST00000446852 NANOS3P60323 173 aaKnown RBP15.73■□□□□ 0.11
SMC6-206ENST00000446852 CCDC58Q4VC31 144 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 OR2Y1Q8NGV0 311 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 TTC28Q96AY4 2481 aa15.73■□□□□ 0.11
SMC6-206ENST00000446852 PRSS37A4D1T9 235 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 OR6A2O95222 327 aa15.72■□□□□ 0.11
SMC6-206ENST00000446852 CFL1P23528 166 aaKnown RBP15.72■□□□□ 0.11
SMC6-206ENST00000446852 INSM1Q01101 510 aaPredicted RBP15.72■□□□□ 0.11
SMC6-206ENST00000446852 PLPPR5Q32ZL2 321 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms