RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 DHCR7Q9UBM7 475 aaKnown RBP7.89□□□□□ -1.15
PTPN3-204ENST00000446349 B3GALT5Q9Y2C3 310 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 PCDHGA5Q9Y5G8 931 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 A0A1W2PPV4 95 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 K7EQM0 130 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 PRAMEF4O60810 478 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 IGLV3-25P01717 112 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 FCER2P06734 321 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 HTR1FP30939 366 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 CLN3Q13286 438 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 ERV3-1Q14264 604 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 VHLLQ6RSH7 139 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 DOK3Q7L591 496 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 ZNF573Q86YE8 665 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 NT5CQ8TCD5 201 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 OR2A14Q96R47 310 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 ST6GALNAC5Q9BVH7 336 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 DDX31Q9H8H2 851 aaKnown RBP7.89□□□□□ -1.15
PTPN3-204ENST00000446349 CEBPZOSA8MTT3 80 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 OR7A17O14581 309 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 IL7P13232 177 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 NAGAP17050 411 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 PTNP21246 168 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 BLOC1S1P78537 153 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 MADCAM1Q13477 382 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 USP51Q70EK9 711 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 SLC35D2Q76EJ3 337 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 TP53INP2Q8IXH6 220 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 MIB2Q96AX9 1013 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 S100PBPQ96BU1 408 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 CRISPLD2Q9H0B8 497 aa7.89□□□□□ -1.15
PTPN3-204ENST00000446349 TCRBV3S1A0A5B6 114 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 RAF1P04049 648 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 OR8G1Q15617 311 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 TP53I3Q53FA7 332 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 ZNF691Q5VV52 312 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 DCUN1D4Q92564 292 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 DAZAP1Q96EP5 407 aaKnown RBP7.88□□□□□ -1.15
PTPN3-204ENST00000446349 KIRREL1Q96J84 757 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 SGPP1Q9BX95 441 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 ZNF391Q9UJN7 358 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 LAMP3Q9UQV4 416 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 ARID1BQ8NFD5 2236 aaPredicted RBP7.88□□□□□ -1.15
PTPN3-204ENST00000446349 FRG2CA6NGY1 282 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 EVI2BP34910 448 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 MPLP40238 635 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 GIPRP48546 466 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 PFN3P60673 137 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 PHC1P78364 1004 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 MAT1AQ00266 395 aaKnown RBP7.88□□□□□ -1.15
PTPN3-204ENST00000446349 GPR19Q15760 415 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 ISL2Q96A47 359 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 GPR87Q9BY21 358 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 RAB22AQ9UL26 194 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 PTPRZ1P23471 2315 aaPredicted RBP7.88□□□□□ -1.15
PTPN3-204ENST00000446349 CCDC88CQ9P219 2028 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 ABCD4O14678 606 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 TGM6O95932 706 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 HBE1P02100 147 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 BMP1P13497 986 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 ZNF791Q3KP31 576 aaPredicted RBP7.88□□□□□ -1.15
PTPN3-204ENST00000446349 ZNF718Q3SXZ3 478 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 TMEM102Q8N9M5 508 aaPredicted RBP7.88□□□□□ -1.15
PTPN3-204ENST00000446349 OR4A16Q8NH70 328 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 STT3BQ8TCJ2 826 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 ZFP90Q8TF47 636 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 PDXPQ96GD0 296 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 CCDC74BQ96LY2 380 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 SORT1Q99523 831 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 FAM173AQ9BQD7 235 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 OR51E2Q9H255 320 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 ATP23Q9Y6H3 246 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 A0A1W2PPK0 400 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 A0A1W2PQL4 384 aaPredicted RBP7.88□□□□□ -1.15
PTPN3-204ENST00000446349 SULT1B1O43704 296 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 CSF2P04141 144 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 RPL27P61353 136 aaKnown RBP7.88□□□□□ -1.15
PTPN3-204ENST00000446349 IKZF1Q13422 519 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 PAN3Q58A45 887 aaKnown RBP7.88□□□□□ -1.15
PTPN3-204ENST00000446349 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.88□□□□□ -1.15
PTPN3-204ENST00000446349 BRICD5Q6PL45 260 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 ETFBKMTQ8IXQ9 262 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 LRRC18Q8N456 261 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 SIMC1Q8NDZ2 872 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 OR4D9Q8NGE8 314 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 ARL11Q969Q4 196 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 FGF22Q9HCT0 170 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 PPT2Q9UMR5 302 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 H3BSA7 217 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 TPT1P13693 172 aaKnown RBP7.88□□□□□ -1.15
PTPN3-204ENST00000446349 PIGAP37287 484 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 DUSP8Q13202 625 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 AQP6Q13520 282 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 SSPNQ14714 243 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 FAM71E1Q6IPT2 247 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 GFRALQ6UXV0 394 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 LSRQ86X29 649 aaPredicted RBP7.88□□□□□ -1.15
PTPN3-204ENST00000446349 DTWD2Q8NBA8 298 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 MED18Q9BUE0 208 aa7.88□□□□□ -1.15
PTPN3-204ENST00000446349 TBC1D29Q9UFV1 150 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms