RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 CD300LFQ8TDQ1 290 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 PAQR8Q8TEZ7 354 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 STMN2Q93045 179 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 CCDC126Q96EE4 140 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 SLC45A3Q96JT2 553 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 OPN3Q9H1Y3 402 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 NEUROG2Q9H2A3 272 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 OR51M1Q9H341 326 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 PRODH2Q9UF12 536 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 MUTYHQ9UIF7 546 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 N6AMT1Q9Y5N5 214 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 MMP24Q9Y5R2 645 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 GMEB1Q9Y692 573 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 ABCA9Q8IUA7 1624 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 CNTLNQ9NXG0 1405 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 ABCA8O94911 1581 aa3.5□□□□□ -1.85
HMGB1P48-201ENST00000446155 MAP3K19Q56UN5 1328 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 COL5A2P05997 1499 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 A0A1B0GWB2 263 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 G3V3Y1 287 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 CETN3O15182 167 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 KDELR3O43731 214 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 AIREO43918 545 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 UGT1A9O60656 530 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 GPX5O75715 221 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 STAMBPO95630 424 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 ALDOBP05062 364 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 HOXD4P09016 255 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 LMO2P25791 158 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 CD82P27701 267 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 HTR1FP30939 366 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 CALCRP30988 508 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 EPHX2P34913 555 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 SLC1A1P43005 524 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 MAGEA9P43362 315 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 CX3CR1P49238 355 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 ARRB1P49407 418 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 GSK3BP49841 420 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 CCNHP51946 323 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 CLDN18P56856 261 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 SLAQ13239 276 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 MICAQ29983 383 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 H3F3CQ6NXT2 135 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 EMBQ6PCB8 327 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 DEGS2Q6QHC5 323 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 ZNF836Q6ZNA1 936 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 CATSPER3Q86XQ3 398 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 MCOLN2Q8IZK6 566 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 C8orf31Q8N9H6 132 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 OR4A15Q8NGL6 344 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 OR56B4Q8NH76 319 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 ASZ1Q8WWH4 475 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 PSMG2Q969U7 264 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 SEC22AQ96IW7 307 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 XPO6Q96QU8 1125 aaKnown RBP3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 CCDC28BQ9BUN5 200 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 GAL3ST2Q9H3Q3 398 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 TMEM165Q9HC07 324 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 MYOZ2Q9NPC6 264 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 ADAP2Q9NPF8 381 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 TIGARQ9NQ88 270 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 DYRK4Q9NR20 520 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 MYEF2Q9P2K5 600 aaKnown RBP3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 NEURL4Q96JN8 1562 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 JCADQ9P266 1359 aa3.49□□□□□ -1.85
HMGB1P48-201ENST00000446155 HECW1Q76N89 1606 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 CYSRT1A8MQ03 144 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 ZNF705EA8MWA4 302 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 M0R3G1 203 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 SLC17A2O00624 439 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 NDUFAB1O14561 156 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 SIVA1O15304 175 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 SOX15O60248 233 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 FGFR1OPO95684 399 aaKnown RBP3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 NPR2P20594 1047 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 SHC1P29353 583 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 OXTRP30559 389 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 C1QTNF8P60827 252 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 LMO4P61968 165 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 SLC10A1Q14973 349 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 ABRAXAS2Q15018 415 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 SYCP1Q15431 976 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 SOHLH1Q5JUK2 328 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 PPM1LQ5SGD2 360 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 GPRC6AQ5T6X5 926 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 CERS6Q6ZMG9 384 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 LRRC49Q8IUZ0 686 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 CMTM8Q8IZV2 173 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 SYCE1Q8N0S2 351 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 IQCKQ8N0W5 287 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 TMEM104Q8NE00 496 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 OR13C9Q8NGT0 318 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 OR52E5Q8NH55 327 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 PYROXD1Q8WU10 500 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 JSRP1Q96MG2 331 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 TMEM175Q9BSA9 504 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 CHIAQ9BZP6 476 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 MFFQ9GZY8 342 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 GNB4Q9HAV0 340 aa3.48□□□□□ -1.85
HMGB1P48-201ENST00000446155 SPRR3Q9UBC9 169 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms