RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 ALG2Q9H553 416 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 EFCAB1Q9HAE3 211 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 TMEM27Q9HBJ8 222 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 CBLN4Q9NTU7 201 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 ARMCX1Q9P291 453 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 CRNNQ9UBG3 495 aaPredicted RBP9.47□□□□□ -0.89
SF3A1-203ENST00000444440 POU2F3Q9UKI9 436 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 RCE1Q9Y256 329 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 ATP23Q9Y6H3 246 aa9.47□□□□□ -0.89
SF3A1-203ENST00000444440 IGHV4-30-2A0A087WSY4 118 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 ARPC4-TTLL3A0A0A6YYG9 625 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 LOC102725191A0A1B0GVB3 256 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 INAFM1C9JVW0 142 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 RPL36A-HNRNPH2H7BZ11 118 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 M0R3G1 203 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 PLPP3O14495 311 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 CHP2O43745 196 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 OR2T1O43869 369 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 SHOX2O60902 331 aaPredicted RBP9.46□□□□□ -0.9
SF3A1-203ENST00000444440 KRT33AO76009 404 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 LY6HO94772 140 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 IGLV1-44P01699 117 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 CECR9P0C854 216 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 COX4I1P13073 169 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 PCSK6P29122 969 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 GNGT1P63211 74 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 IL1RL1Q01638 556 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 POU3F1Q03052 451 aaPredicted RBP9.46□□□□□ -0.9
SF3A1-203ENST00000444440 TGFBR3Q03167 851 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 CEACAM16Q2WEN9 425 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 AGAP6Q5VW22 663 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 ZNF613Q6PF04 617 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 C5orf46Q6UWT4 87 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 CCDC80Q76M96 950 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 ARPINQ7Z6K5 226 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 RANBP3LQ86VV4 465 aaPredicted RBP9.46□□□□□ -0.9
SF3A1-203ENST00000444440 PRIMA1Q86XR5 153 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 LRRC17Q8N6Y2 441 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 OR6S1Q8NH40 331 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 MAGEE2Q8TD90 523 aaPredicted RBP9.46□□□□□ -0.9
SF3A1-203ENST00000444440 TRMT61AQ96FX7 289 aaKnown RBP9.46□□□□□ -0.9
SF3A1-203ENST00000444440 RADILQ96JH8 1075 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 ZNF583Q96ND8 569 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 SLC38A2Q96QD8 506 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 HOPXQ9BPY8 73 aaPredicted RBP9.46□□□□□ -0.9
SF3A1-203ENST00000444440 ZNF426Q9BUY5 554 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 PCDHAC1Q9H158 963 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 NOX3Q9HBY0 568 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 SLC7A7Q9UM01 511 aa9.46□□□□□ -0.9
SF3A1-203ENST00000444440 HIVEP2P31629 2446 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 SLC35F4A4IF30 521 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 C11orf98E9PRG8 122 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 KPNA4O00629 521 aaPredicted RBP9.45□□□□□ -0.9
SF3A1-203ENST00000444440 NDUFAB1O14561 156 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 SSX4O60224 188 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 SNX3O60493 162 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 FMO6PO60774 539 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 SLC43A1O75387 559 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 SERPINI2O75830 405 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 WNT11O96014 354 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 NQO1P15559 274 aaKnown RBP9.45□□□□□ -0.9
SF3A1-203ENST00000444440 DRD4P21917 467 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 NAAAQ02083 359 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 PUDPQ08623 228 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 PMS2P3Q13401 168 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 CAMK2DQ13557 499 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 C1DQ13901 141 aaKnown RBP9.45□□□□□ -0.9
SF3A1-203ENST00000444440 ZNF74Q16587 644 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 SWT1Q5T5J6 900 aaKnown RBP9.45□□□□□ -0.9
SF3A1-203ENST00000444440 HMBOX1Q6NT76 420 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 ANKRD16Q6P6B7 361 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 KLHL24Q6TFL4 600 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 SLC46A3Q7Z3Q1 461 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 ABHD12BQ7Z5M8 362 aaPredicted RBP9.45□□□□□ -0.9
SF3A1-203ENST00000444440 CARM1Q86X55 608 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 NKAIN4Q8IVV8 208 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 UEVLDQ8IX04 471 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 C20orf196Q8IYI0 205 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 FBXL14Q8N1E6 418 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 POU5F2Q8N7G0 328 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 SCAIQ8N9R8 606 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 RCN3Q96D15 328 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 ZNF75AQ96N20 296 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 REG4Q9BYZ8 158 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 CRLF2Q9HC73 371 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 MEPEQ9NQ76 525 aaPredicted RBP9.45□□□□□ -0.9
SF3A1-203ENST00000444440 MRPL39Q9NYK5 338 aaKnown RBP9.45□□□□□ -0.9
SF3A1-203ENST00000444440 ZNF224Q9NZL3 707 aa9.45□□□□□ -0.9
SF3A1-203ENST00000444440 ZNF99A8MXY4 864 aaPredicted RBP9.44□□□□□ -0.9
SF3A1-203ENST00000444440 GPRIN2O60269 458 aa9.44□□□□□ -0.9
SF3A1-203ENST00000444440 CH25HO95992 272 aa9.44□□□□□ -0.9
SF3A1-203ENST00000444440 IGKV3-15P01624 115 aa9.44□□□□□ -0.9
SF3A1-203ENST00000444440 PRDX6P30041 224 aa9.44□□□□□ -0.9
SF3A1-203ENST00000444440 APOBEC3AP31941 199 aaPredicted RBP9.44□□□□□ -0.9
SF3A1-203ENST00000444440 OR1E2P47887 323 aa9.44□□□□□ -0.9
SF3A1-203ENST00000444440 IDH3GP51553 393 aaPredicted RBP9.44□□□□□ -0.9
SF3A1-203ENST00000444440 UGT2B15P54855 530 aa9.44□□□□□ -0.9
SF3A1-203ENST00000444440 LSM11P83369 360 aaKnown RBP eCLIP9.44□□□□□ -0.9
SF3A1-203ENST00000444440 HGFACQ04756 655 aa9.44□□□□□ -0.9
SF3A1-203ENST00000444440 MELKQ14680 651 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms