RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 GPR35Q9HC97 309 aa18.41■□□□□ 0.54
CDKN3-204ENST00000442975 NANSQ9NR45 359 aa18.41■□□□□ 0.54
CDKN3-204ENST00000442975 AP3M1Q9Y2T2 418 aa18.41■□□□□ 0.54
CDKN3-204ENST00000442975 E7EQL1 145 aa18.4■□□□□ 0.54
CDKN3-204ENST00000442975 INHBBP09529 407 aa18.4■□□□□ 0.54
CDKN3-204ENST00000442975 PAX1P15863 534 aa18.4■□□□□ 0.54
CDKN3-204ENST00000442975 CEACAM16Q2WEN9 425 aa18.4■□□□□ 0.54
CDKN3-204ENST00000442975 NANOGNBQ7Z5D8 188 aa18.4■□□□□ 0.54
CDKN3-204ENST00000442975 OR6N1Q8NGY5 312 aa18.4■□□□□ 0.54
CDKN3-204ENST00000442975 TRMT61AQ96FX7 289 aaKnown RBP18.4■□□□□ 0.54
CDKN3-204ENST00000442975 TXNDC15Q96J42 360 aa18.4■□□□□ 0.54
CDKN3-204ENST00000442975 SMR3AQ99954 134 aa18.4■□□□□ 0.54
CDKN3-204ENST00000442975 KCNS3Q9BQ31 491 aa18.4■□□□□ 0.54
CDKN3-204ENST00000442975 TRAF4Q9BUZ4 470 aaPredicted RBP18.4■□□□□ 0.54
CDKN3-204ENST00000442975 SLC19A3Q9BZV2 496 aa18.4■□□□□ 0.54
CDKN3-204ENST00000442975 EFCAB1Q9HAE3 211 aa18.4■□□□□ 0.54
CDKN3-204ENST00000442975 SLC35F4A4IF30 521 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 ZNF726A6NNF4 738 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 SMAD7O15105 426 aaKnown RBP18.39■□□□□ 0.53
CDKN3-204ENST00000442975 GSTA4O15217 222 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 RNF13O43567 381 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 OR5F1O95221 314 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 HIST1H2ABP04908 130 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 LSP1P33241 339 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 CAPZA2P47755 286 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 FABP6P51161 128 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 PIN1Q13526 163 aaPredicted RBP18.39■□□□□ 0.53
CDKN3-204ENST00000442975 CAMK2DQ13557 499 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 PHYHD1Q5SRE7 291 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 AGAP6Q5VW22 663 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 HIST3H2AQ7L7L0 130 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 PXKQ7Z7A4 578 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 SLC15A3Q8IY34 581 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 C20orf196Q8IYI0 205 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 LRRC17Q8N6Y2 441 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 PFN4Q8NHR9 129 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 TMEM255BQ8WV15 326 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 HIST1H2ACQ93077 130 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 ZNF837Q96EG3 531 aaPredicted RBP18.39■□□□□ 0.53
CDKN3-204ENST00000442975 DHRS9Q9BPW9 319 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 PRSS27Q9BQR3 290 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 ZNF426Q9BUY5 554 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 ULBP2Q9BZM5 246 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 NELFAQ9H3P2 528 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 B3GAT2Q9NPZ5 323 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 ZNF229Q9UJW7 825 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 MOKQ9UQ07 419 aa18.39■□□□□ 0.53
CDKN3-204ENST00000442975 IGHV1-18A0A0C4DH31 117 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 RPL36A-HNRNPH2H7BZ11 118 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 OVOL3O00110 214 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 NME4O00746 187 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 ZNF682O95780 498 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 IFNGR1P15260 489 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 GYS2P54840 703 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 BIDP55957 195 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 C1QTNF12Q5T7M4 302 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 CPLX4Q7Z7G2 160 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 BIVMQ86UB2 503 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 DTX2Q86UW9 622 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 NKAIN4Q8IVV8 208 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 FBXL14Q8N1E6 418 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 CIARTQ8N365 385 aaPredicted RBP18.38■□□□□ 0.53
CDKN3-204ENST00000442975 ANKK1Q8NFD2 765 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 LZICQ8WZA0 190 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 CMTM5Q96DZ9 223 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 COX4I2Q96KJ9 171 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 HS6ST2Q96MM7 605 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 SLC38A2Q96QD8 506 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 HOPXQ9BPY8 73 aaPredicted RBP18.38■□□□□ 0.53
CDKN3-204ENST00000442975 RIMS3Q9UJD0 308 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 SETD2Q9BYW2 2564 aaPredicted RBP18.38■□□□□ 0.53
CDKN3-204ENST00000442975 USF3Q68DE3 2245 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 ZFHX3Q15911 3703 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 C2CD3Q4AC94 2353 aa18.38■□□□□ 0.53
CDKN3-204ENST00000442975 NF1P21359 2839 aa18.37■□□□□ 0.53
CDKN3-204ENST00000442975 DSCAMO60469 2012 aa18.37■□□□□ 0.53
CDKN3-204ENST00000442975 CADP27708 2225 aa18.37■□□□□ 0.53
CDKN3-204ENST00000442975 ARID1AO14497 2285 aa18.37■□□□□ 0.53
CDKN3-204ENST00000442975 ARPC4-TTLL3A0A0A6YYG9 625 aa18.37■□□□□ 0.53
CDKN3-204ENST00000442975 CXCR6O00574 342 aa18.37■□□□□ 0.53
CDKN3-204ENST00000442975 CD8AP01732 235 aa18.37■□□□□ 0.53
CDKN3-204ENST00000442975 DRD4P21917 467 aa18.37■□□□□ 0.53
CDKN3-204ENST00000442975 TTKP33981 857 aa18.37■□□□□ 0.53
CDKN3-204ENST00000442975 CSNK1A1P48729 337 aa18.37■□□□□ 0.53
CDKN3-204ENST00000442975 UGT2B15P54855 530 aa18.37■□□□□ 0.53
CDKN3-204ENST00000442975 GNGT1P63211 74 aa18.37■□□□□ 0.53
CDKN3-204ENST00000442975 MELKQ14680 651 aa18.37■□□□□ 0.53
CDKN3-204ENST00000442975 SLC46A3Q7Z3Q1 461 aa18.37■□□□□ 0.53
CDKN3-204ENST00000442975 VTCN1Q7Z7D3 282 aa18.37■□□□□ 0.53
CDKN3-204ENST00000442975 WDFY1Q8IWB7 410 aa18.37■□□□□ 0.53
CDKN3-204ENST00000442975 MUC15Q8N387 334 aa18.37■□□□□ 0.53
CDKN3-204ENST00000442975 MAGEE2Q8TD90 523 aaPredicted RBP18.37■□□□□ 0.53
CDKN3-204ENST00000442975 BOD1Q96IK1 185 aa18.37■□□□□ 0.53
CDKN3-204ENST00000442975 BDH2Q9BUT1 245 aa18.37■□□□□ 0.53
CDKN3-204ENST00000442975 CACNG6Q9BXT2 260 aa18.37■□□□□ 0.53
CDKN3-204ENST00000442975 POLR2J2Q9GZM3 115 aaKnown RBP18.37■□□□□ 0.53
CDKN3-204ENST00000442975 POLR2J3Q9H1A7 115 aaKnown RBP18.37■□□□□ 0.53
CDKN3-204ENST00000442975 MEPEQ9NQ76 525 aaPredicted RBP18.37■□□□□ 0.53
CDKN3-204ENST00000442975 ZNF99A8MXY4 864 aaPredicted RBP18.36■□□□□ 0.53
CDKN3-204ENST00000442975 SNX3O60493 162 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms