RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 PRR32B1ATL7 298 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 H7C417 338 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 F12P00748 615 aaPredicted RBP18.55■□□□□ 0.56
SHOX2-203ENST00000441443 MEOX2P50222 304 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 LTBQ06643 244 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 ZIC1Q15915 447 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 MANEAQ5SRI9 462 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 FIGNL1Q6PIW4 674 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 RAB11FIP2Q7L804 512 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 ZFP82Q8N141 532 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 OR2L5Q8NG80 312 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 OR1S2Q8NGQ3 325 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 MS4A4EQ96PG1 132 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 MTFP1Q9UDX5 166 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 APOBEC3BQ9UH17 382 aaKnown RBP18.55■□□□□ 0.56
SHOX2-203ENST00000441443 OR1A2Q9Y585 309 aa18.55■□□□□ 0.56
SHOX2-203ENST00000441443 IGLON5A6NGN9 336 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 NGFRP08138 427 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 AK4P27144 223 aaPredicted RBP18.54■□□□□ 0.56
SHOX2-203ENST00000441443 ILF3Q12906 894 aaKnown RBP eCLIP18.54■□□□□ 0.56
SHOX2-203ENST00000441443 ELAVL3Q14576 367 aaKnown RBP18.54■□□□□ 0.56
SHOX2-203ENST00000441443 ARHGAP11BQ3KRB8 267 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 GXYLT1Q4G148 440 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 TMED4Q7Z7H5 227 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 ZNF614Q8N883 585 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 PTCHD1Q96NR3 888 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 CMSS1Q9BQ75 279 aaKnown RBP18.54■□□□□ 0.56
SHOX2-203ENST00000441443 APMAPQ9HDC9 416 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 ADAP2Q9NPF8 381 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 ZNF337Q9Y3M9 751 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 CD3DP04234 171 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 ID2Q02363 134 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 KCNAB1Q14722 419 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 LY6G6FQ5SQ64 297 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 FAM109BQ6ICB4 259 aaPredicted RBP18.54■□□□□ 0.56
SHOX2-203ENST00000441443 ARHGAP11AQ6P4F7 1023 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 BEST3Q8N1M1 668 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 OR6N1Q8NGY5 312 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 ZPLD1Q8TCW7 415 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 NMNAT3Q96T66 252 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 POFUT1Q9H488 388 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 IGFLR1Q9H665 355 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 ZNF346Q9UL40 294 aaKnown RBP18.54■□□□□ 0.56
SHOX2-203ENST00000441443 ICAM5Q9UMF0 924 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 PCDHB10Q9UN67 800 aa18.54■□□□□ 0.56
SHOX2-203ENST00000441443 VEGFDO43915 354 aa18.53■□□□□ 0.56
SHOX2-203ENST00000441443 GPRIN2O60269 458 aa18.53■□□□□ 0.56
SHOX2-203ENST00000441443 SLC25A12O75746 678 aa18.53■□□□□ 0.56
SHOX2-203ENST00000441443 SLC35G4P0C7Q5 338 aa18.53■□□□□ 0.56
SHOX2-203ENST00000441443 CALCBP10092 127 aa18.53■□□□□ 0.56
SHOX2-203ENST00000441443 HOXB1P14653 301 aaPredicted RBP18.53■□□□□ 0.56
SHOX2-203ENST00000441443 SLC6A6P31641 620 aa18.53■□□□□ 0.56
SHOX2-203ENST00000441443 KCNJ3P48549 501 aa18.53■□□□□ 0.56
SHOX2-203ENST00000441443 PON3Q15166 354 aa18.53■□□□□ 0.56
SHOX2-203ENST00000441443 TRMT12Q53H54 448 aaKnown RBP18.53■□□□□ 0.56
SHOX2-203ENST00000441443 SLC19A3Q9BZV2 496 aa18.53■□□□□ 0.56
SHOX2-203ENST00000441443 PITHD1Q9GZP4 211 aaPredicted RBP18.53■□□□□ 0.56
SHOX2-203ENST00000441443 MRPS30Q9NP92 439 aaKnown RBP18.53■□□□□ 0.56
SHOX2-203ENST00000441443 SNRNP200O75643 2136 aaKnown RBP18.53■□□□□ 0.56
SHOX2-203ENST00000441443 TBC1D3KA0A087X1G2 549 aa18.53■□□□□ 0.56
SHOX2-203ENST00000441443 KANTRA0A1W2PQU2 76 aa18.53■□□□□ 0.56
SHOX2-203ENST00000441443 TBC1D3FA6NER0 549 aaPredicted RBP18.53■□□□□ 0.56
SHOX2-203ENST00000441443 ADCYAP1P18509 176 aa18.53■□□□□ 0.56
SHOX2-203ENST00000441443 HSD17B2P37059 387 aa18.53■□□□□ 0.56
SHOX2-203ENST00000441443 EFNB2P52799 333 aa18.53■□□□□ 0.56
SHOX2-203ENST00000441443 TBC1D3GQ6DHY5 549 aa18.53■□□□□ 0.56
SHOX2-203ENST00000441443 JMJD6Q6NYC1 403 aaPredicted RBP18.53■□□□□ 0.56
SHOX2-203ENST00000441443 KRT77Q7Z794 578 aa18.53■□□□□ 0.56
SHOX2-203ENST00000441443 LINC00469Q8N7U9 141 aa18.53■□□□□ 0.56
SHOX2-203ENST00000441443 NKX3-1Q99801 234 aaPredicted RBP18.53■□□□□ 0.56
SHOX2-203ENST00000441443 KCNK15Q9H427 330 aa18.53■□□□□ 0.56
SHOX2-203ENST00000441443 ASF1BQ9NVP2 202 aa18.53■□□□□ 0.56
SHOX2-203ENST00000441443 A0A1B0GTH9 108 aa18.52■□□□□ 0.56
SHOX2-203ENST00000441443 EDDM13A0A1B0GTR0 161 aa18.52■□□□□ 0.56
SHOX2-203ENST00000441443 NARSO43776 548 aaKnown RBP18.52■□□□□ 0.56
SHOX2-203ENST00000441443 FHL1Q13642 323 aa18.52■□□□□ 0.56
SHOX2-203ENST00000441443 ODF4Q2M2E3 257 aa18.52■□□□□ 0.56
SHOX2-203ENST00000441443 ZNF528Q3MIS6 628 aa18.52■□□□□ 0.56
SHOX2-203ENST00000441443 METRNLQ641Q3 311 aa18.52■□□□□ 0.56
SHOX2-203ENST00000441443 ERN2Q76MJ5 926 aaKnown RBP18.52■□□□□ 0.56
SHOX2-203ENST00000441443 FGF13Q92913 245 aa18.52■□□□□ 0.56
SHOX2-203ENST00000441443 Q96M85 177 aa18.52■□□□□ 0.56
SHOX2-203ENST00000441443 TRPV4Q9HBA0 871 aa18.52■□□□□ 0.56
SHOX2-203ENST00000441443 PAK4O96013 591 aaPredicted RBP18.52■□□□□ 0.56
SHOX2-203ENST00000441443 APOC1P02654 83 aa18.52■□□□□ 0.56
SHOX2-203ENST00000441443 HNRNPA1P09651 372 aaKnown RBP eCLIP18.52■□□□□ 0.56
SHOX2-203ENST00000441443 NID1P14543 1247 aa18.52■□□□□ 0.56
SHOX2-203ENST00000441443 BDKRB2P30411 391 aa18.52■□□□□ 0.56
SHOX2-203ENST00000441443 P2RY2P41231 377 aa18.52■□□□□ 0.56
SHOX2-203ENST00000441443 PPIAP62937 165 aaKnown RBP18.52■□□□□ 0.56
SHOX2-203ENST00000441443 POMGNT2Q8NAT1 580 aa18.52■□□□□ 0.56
SHOX2-203ENST00000441443 WFIKKN2Q8TEU8 576 aa18.52■□□□□ 0.56
SHOX2-203ENST00000441443 VRK1Q99986 396 aaPredicted RBP18.52■□□□□ 0.56
SHOX2-203ENST00000441443 CAPN10Q9HC96 672 aa18.52■□□□□ 0.56
SHOX2-203ENST00000441443 TMEM218A2RU14 115 aa18.52■□□□□ 0.55
SHOX2-203ENST00000441443 OR6C68A6NDL8 312 aa18.52■□□□□ 0.55
SHOX2-203ENST00000441443 MCIDASD6RGH6 385 aa18.52■□□□□ 0.55
SHOX2-203ENST00000441443 TAF13Q15543 124 aa18.52■□□□□ 0.55
SHOX2-203ENST00000441443 MLF2Q15773 248 aaPredicted RBP18.52■□□□□ 0.55
SHOX2-203ENST00000441443 MPPED2Q15777 294 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms