RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 LRRC42Q9Y546 428 aa6.66□□□□□ -1.34
UBR3-205ENST00000439681 FAM215AQ9Y5M1 114 aa6.66□□□□□ -1.34
UBR3-205ENST00000439681 CACNA1BQ00975 2339 aa6.66□□□□□ -1.34
UBR3-205ENST00000439681 IGSF10Q6WRI0 2623 aa6.66□□□□□ -1.34
UBR3-205ENST00000439681 M0R129 80 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 SURF4O15260 269 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 IDH3BO43837 385 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 WDR1O75083 606 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 SERPINI2O75830 405 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 GABRA1P14867 456 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 HIST1H1CP16403 213 aaKnown RBP6.65□□□□□ -1.34
UBR3-205ENST00000439681 ABOP16442 354 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 ZNF43P17038 809 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 PTGER4P35408 488 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 CDKN2AP42771 156 aaKnown RBP6.65□□□□□ -1.34
UBR3-205ENST00000439681 HSPA13P48723 471 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 RPL27P61353 136 aaKnown RBP6.65□□□□□ -1.34
UBR3-205ENST00000439681 POU3F1Q03052 451 aaPredicted RBP6.65□□□□□ -1.34
UBR3-205ENST00000439681 C1DQ13901 141 aaKnown RBP6.65□□□□□ -1.34
UBR3-205ENST00000439681 KEAP1Q14145 624 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 TAF11Q15544 211 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 UEVLDQ8IX04 471 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 RPRMLQ8N4K4 120 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 ARIH2OSQ8N7S6 290 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 C9orf106Q8NAJ2 232 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 ZNF555Q8NEP9 628 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 ASB10Q8WXI3 467 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 RASD2Q96D21 266 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 MUS81Q96NY9 551 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 POLDIP3Q9BY77 421 aaKnown RBP6.65□□□□□ -1.34
UBR3-205ENST00000439681 PRRG4Q9BZD6 226 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 BCO1Q9HAY6 547 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 ZNF226Q9NYT6 803 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 TVP23BQ9NYZ1 205 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 RAB26Q9ULW5 256 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 CLEC4AQ9UMR7 237 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 BAIAP2Q9UQB8 552 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 GMPPBQ9Y5P6 360 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 FLVCR1Q9Y5Y0 555 aa6.65□□□□□ -1.34
UBR3-205ENST00000439681 PRRC2CQ9Y520 2896 aaKnown RBP6.65□□□□□ -1.34
UBR3-205ENST00000439681 TEX13CA0A0J9YWL9 993 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 A0A1W2PRG6 482 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 ZNF724A8MTY0 619 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 PRRG2O14669 202 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 PRKYO43930 277 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 ZNF432O94892 652 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 TOXO94900 526 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 BCL10O95999 233 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 PRB1P04280 392 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 HMGN1P05114 100 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 HOXD4P09016 255 aaPredicted RBP6.65□□□□□ -1.35
UBR3-205ENST00000439681 GABRB1P18505 474 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 ACVR2AP27037 513 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 SDHAP31040 664 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 RPS6KA3P51812 740 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 DBPQ10586 325 aaPredicted RBP6.65□□□□□ -1.35
UBR3-205ENST00000439681 TOP3AQ13472 1001 aaPredicted RBP6.65□□□□□ -1.35
UBR3-205ENST00000439681 MELKQ14680 651 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 RNPS1Q15287 305 aaKnown RBP6.65□□□□□ -1.35
UBR3-205ENST00000439681 GUSBP1Q15486 140 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 MESTQ5EB52 335 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 C1orf185Q5T7R7 199 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 ZNF691Q5VV52 312 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 GPR139Q6DWJ6 353 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 C3P1Q6ZMU1 363 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 PTCHD4Q6ZW05 846 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 TUSC5Q8IXB3 177 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 NPEPL1Q8NDH3 523 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 EMC6Q9BV81 110 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 MRPL13Q9BYD1 178 aaKnown RBP6.65□□□□□ -1.35
UBR3-205ENST00000439681 NDEL1Q9GZM8 345 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 CMC2Q9NRP2 79 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 GRHPRQ9UBQ7 328 aa6.65□□□□□ -1.35
UBR3-205ENST00000439681 SPTA1P02549 2419 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 SLC35F4A4IF30 521 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 MBD3L4A6NDZ8 208 aaPredicted RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 MBD3L3A6NE82 208 aaPredicted RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 MBD3L5A6NJ08 208 aaPredicted RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 FIGNL2A6NMB9 653 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 DENRO43583 198 aaKnown RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 YES1P07947 543 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 EDNRAP25101 427 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 ACVR1BP36896 505 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 PCYT1AP49585 367 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 BIDP55957 195 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 CLDN17P56750 224 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 ISL1P61371 349 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 RBPJQ06330 500 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 SF3B4Q15427 424 aaKnown RBP eCLIP6.64□□□□□ -1.355e-7■■■■■ 32.8
UBR3-205ENST00000439681 SNAPC1Q16533 368 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 SOWAHCQ53LP3 525 aaPredicted RBP6.64□□□□□ -1.35
UBR3-205ENST00000439681 EEF1A1P5Q5VTE0 462 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 GTF2IRD2BQ6EKJ0 949 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 LAIR2Q6ISS4 152 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 GTF2IRD2Q86UP8 949 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 ENTHD1Q8IYW4 607 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 TMEM123Q8N131 208 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 MARVELD2Q8N4S9 558 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 SLC37A3Q8NCC5 494 aa6.64□□□□□ -1.35
UBR3-205ENST00000439681 OR52E2Q8NGJ4 325 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms