RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 TAGLNQ01995 201 aaKnown RBP6.14□□□□□ -1.43
CSDE1-205ENST00000438362 TLE3Q04726 772 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 BCL2A1Q16548 175 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF770Q6IQ21 691 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-205ENST00000438362 TEX261Q6UWH6 196 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 NDUFAF7Q7L592 441 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 TMPRSS9Q7Z410 1059 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 SLC51BQ86UW2 128 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 FAM3CQ92520 227 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 DCUN1D4Q92564 292 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 FOXRED1Q96CU9 486 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-205ENST00000438362 TRMT61AQ96FX7 289 aaKnown RBP6.14□□□□□ -1.43
CSDE1-205ENST00000438362 AUNIPQ9H7T9 357 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 APMAPQ9HDC9 416 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 OBP2AQ9NY56 170 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 PPP4R1LQ9P1A2 415 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 U3KQ87 197 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 ARID1AO14497 2285 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 RLFQ13129 1914 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 PSME4Q14997 1843 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 TMEM269A0A1B0GVZ9 245 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 HEXBP07686 556 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 CISD3P0C7P0 127 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 ATF1P18846 271 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 DRD1P21728 446 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 CDK2P24941 298 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 MAOBP27338 520 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 ADH6P28332 368 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 HTR2CP28335 458 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 TNFRSF4P43489 277 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 LSM11P83369 360 aaKnown RBP eCLIP6.14□□□□□ -1.43
CSDE1-205ENST00000438362 GALK2Q01415 458 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 MC2RQ01718 297 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 SGCAQ16586 387 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 MEP1BQ16820 701 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 TOR2AQ5JU69 321 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 TMPRSS11FQ6ZWK6 438 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 C19orf47Q8N9M1 422 aaKnown RBP6.14□□□□□ -1.43
CSDE1-205ENST00000438362 OR5H2Q8NGV7 314 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 ANGPTL6Q8NI99 470 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 FAM3DQ96BQ1 224 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 CPNE2Q96FN4 548 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-205ENST00000438362 PGAM5Q96HS1 289 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 DERL3Q96Q80 235 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 DHRS9Q9BPW9 319 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 SLC6A17Q9H1V8 727 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 SIGLEC7Q9Y286 467 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 TRPM6Q9BX84 2022 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 A0A1B0GUH1 482 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 CPED1A4D0V7 1026 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 LINC01553A4QN01 128 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 GALR2O43603 387 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-205ENST00000438362 SDC3O75056 442 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 MSL3P1P0C860 447 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 SLC6A1P30531 599 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 CD79BP40259 229 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 ADPRHP54922 357 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 TAS2R31P59538 309 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 SEC61A1P61619 476 aaKnown RBP6.14□□□□□ -1.43
CSDE1-205ENST00000438362 TDGQ13569 410 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 CBFBQ13951 182 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 BEX5Q5H9J7 111 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 C1QTNF12Q5T7M4 302 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 C1orf189Q5VU69 101 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 CARD17Q5XLA6 110 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 MED25Q71SY5 747 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 BOLLQ8N9W6 283 aaKnown RBP6.14□□□□□ -1.43
CSDE1-205ENST00000438362 SCARB1Q8WTV0 552 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 ZC3HAV1LQ96H79 300 aaKnown RBP6.14□□□□□ -1.43
CSDE1-205ENST00000438362 SLC25A21Q9BQT8 299 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-205ENST00000438362 ERVMER34-1Q9H9K5 563 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 WSB2Q9NYS7 404 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-205ENST00000438362 LSM2Q9Y333 95 aaKnown RBP6.14□□□□□ -1.43
CSDE1-205ENST00000438362 SCN10AQ9Y5Y9 1956 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF236Q9UL36 1845 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 BORCS7-ASMTA0A0B4J1R7 106 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 CDC14CA4D256 554 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 FAM221BA6H8Z2 402 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 CDC42EP2O14613 210 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 GLP1RP43220 463 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 RAD52P43351 418 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 DAP3P51398 398 aaKnown RBP6.14□□□□□ -1.43
CSDE1-205ENST00000438362 TMEM31Q5JXX7 168 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 NKAPLQ5M9Q1 402 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 AGBL4Q5VU57 503 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 MAMSTRQ6ZN01 415 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 DGLUCYQ7Z3D6 616 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 ACBD4Q8NC06 268 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 OR51S1Q8NGJ8 323 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 OR10K1Q8NGX5 313 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 DVL3Q92997 716 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF578Q96N58 590 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-205ENST00000438362 ABHD1Q96SE0 405 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 CDCA3Q99618 268 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-205ENST00000438362 NRTNQ99748 197 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 RNF32Q9H0A6 362 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 C8orf33Q9H7E9 229 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-205ENST00000438362 C20orf141Q9NUB4 165 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 SDHAF2Q9NX18 166 aa6.14□□□□□ -1.43
CSDE1-205ENST00000438362 ACAD8Q9UKU7 415 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms