RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 OC90Q02509 493 aaPredicted RBP15.26■□□□□ 0.03
TTC3-209ENST00000438055 PRAMEF17Q5VTA0 474 aa15.26■□□□□ 0.03
TTC3-209ENST00000438055 OR2T4Q8NH00 348 aa15.26■□□□□ 0.03
TTC3-209ENST00000438055 PMEPA1Q969W9 287 aa15.26■□□□□ 0.03
TTC3-209ENST00000438055 KTI12Q96EK9 354 aaPredicted RBP15.26■□□□□ 0.03
TTC3-209ENST00000438055 TBL1XR1Q9BZK7 514 aa15.26■□□□□ 0.03
TTC3-209ENST00000438055 NOX3Q9HBY0 568 aa15.26■□□□□ 0.03
TTC3-209ENST00000438055 UNC13CQ8NB66 2214 aa15.26■□□□□ 0.03
TTC3-209ENST00000438055 C7orf66A4D0T2 115 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 ZSCAN5BA6NJL1 495 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 DCTN6O00399 190 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 ZNF264O43296 627 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 DOK2O60496 412 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 PNMTP11086 282 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 POU3F3P20264 500 aaPredicted RBP15.25■□□□□ 0.03
TTC3-209ENST00000438055 CDK2P24941 298 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 CCKBRP32239 447 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 GPR3P46089 330 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 RPL18Q07020 188 aaKnown RBP15.25■□□□□ 0.03
TTC3-209ENST00000438055 HTR4Q13639 388 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 Q499Y3 187 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 CCDC28AQ8IWP9 274 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 ZNF680Q8NEM1 530 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 TSLPQ969D9 159 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 PDE7BQ9NP56 450 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 KLHDC2Q9Y2U9 406 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 RP1P56715 2156 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 C17orf51A8MQB3 221 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 UTS2O95399 124 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 SPARCP09486 303 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 ANXA7P20073 488 aaKnown RBP15.25■□□□□ 0.03
TTC3-209ENST00000438055 ARPC4P59998 168 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 SNTA1Q13424 505 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 FHL1Q13642 323 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 ALKBH1Q13686 389 aaKnown RBP15.25■□□□□ 0.03
TTC3-209ENST00000438055 DEFB133Q30KQ1 61 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 KIAA0895LQ68EN5 471 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 DDOQ99489 341 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 LPAR4Q99677 370 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 WDR76Q9H967 626 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 COQ3Q9NZJ6 369 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 ARPC3O15145 178 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 ALDOBP05062 364 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 IGHV4-34P06331 123 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 NR0B1P51843 470 aaKnown RBP15.25■□□□□ 0.03
TTC3-209ENST00000438055 PSMA6P60900 246 aaKnown RBP15.25■□□□□ 0.03
TTC3-209ENST00000438055 SLC35D3Q5M8T2 416 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 YOD1Q5VVQ6 348 aaPredicted RBP15.25■□□□□ 0.03
TTC3-209ENST00000438055 STAC2Q6ZMT1 411 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 CHMP1BQ7LBR1 199 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 PM20D2Q8IYS1 436 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 LRRC61Q9BV99 259 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 CLEC1BQ9P126 229 aa15.25■□□□□ 0.03
TTC3-209ENST00000438055 PRR32B1ATL7 298 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 HRGP04196 525 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 MAPK3P27361 379 aaPredicted RBP15.24■□□□□ 0.03
TTC3-209ENST00000438055 CD1CP29017 333 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 RAD52P43351 418 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 P2RX3P56373 397 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 ZNF74Q16587 644 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 ZBTB37Q5TC79 503 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 LIX1LQ8IVB5 337 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 ZNF440Q8IYI8 595 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 SIX5Q8N196 739 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 OR10AC1Q8NH08 325 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 NXPE2Q96DL1 559 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 C7orf50Q9BRJ6 194 aaKnown RBP15.24■□□□□ 0.03
TTC3-209ENST00000438055 PCDHGA9Q9Y5G4 932 aaKnown RBP15.24■□□□□ 0.03
TTC3-209ENST00000438055 FANCMQ8IYD8 2048 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 M0R233 179 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 SMAD9O15198 467 aaKnown RBP15.24■□□□□ 0.03
TTC3-209ENST00000438055 SLC22A5O76082 557 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 ECDO95905 644 aaPredicted RBP15.24■□□□□ 0.03
TTC3-209ENST00000438055 ZP2Q05996 745 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 SQSTM1Q13501 440 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 LRRN1Q6UXK5 716 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 ZNF782Q6ZMW2 699 aaPredicted RBP15.24■□□□□ 0.03
TTC3-209ENST00000438055 SHISA6Q6ZSJ9 500 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 CMIPQ8IY22 773 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.24■□□□□ 0.03
TTC3-209ENST00000438055 MYEF2Q9P2K5 600 aaKnown RBP15.24■□□□□ 0.03
TTC3-209ENST00000438055 MMP17Q9ULZ9 603 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 CHURC1-FNTBB4DL54 471 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 PER3P56645 1201 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 KLF9Q13886 244 aaPredicted RBP15.24■□□□□ 0.03
TTC3-209ENST00000438055 PCGF3Q3KNV8 242 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 SLC16A9Q7RTY1 509 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 TCTN2Q96GX1 697 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 SLC7A5P2Q9GIP4 190 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.24■□□□□ 0.033e-10■□□□□ 9.4
TTC3-209ENST00000438055 ZFP64Q9NPA5 681 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 ZNF224Q9NZL3 707 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 OR5V1Q9UGF6 321 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 PLCL2Q9UPR0 1127 aa15.24■□□□□ 0.03
TTC3-209ENST00000438055 A0A1B0GVI7 797 aa15.23■□□□□ 0.03
TTC3-209ENST00000438055 NSA2O95478 260 aaKnown RBP15.23■□□□□ 0.03
TTC3-209ENST00000438055 IFNA7P01567 189 aa15.23■□□□□ 0.03
TTC3-209ENST00000438055 SDHAP31040 664 aa15.23■□□□□ 0.03
TTC3-209ENST00000438055 SELENOPP49908 381 aa15.23■□□□□ 0.03
TTC3-209ENST00000438055 C1orf189Q5VU69 101 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms