RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 EPYCQ99645 322 aa17.44■□□□□ 0.38
HLA-B-250ENST00000434333 TMEM43Q9BTV4 400 aa17.44■□□□□ 0.38
HLA-B-250ENST00000434333 EMC6Q9BV81 110 aa17.44■□□□□ 0.38
HLA-B-250ENST00000434333 PLK3Q9H4B4 646 aa17.44■□□□□ 0.38
HLA-B-250ENST00000434333 RABEP2Q9H5N1 569 aa17.44■□□□□ 0.38
HLA-B-250ENST00000434333 MOV10Q9HCE1 1003 aaKnown RBP17.44■□□□□ 0.38
HLA-B-250ENST00000434333 MED29Q9NX70 200 aa17.44■□□□□ 0.38
HLA-B-250ENST00000434333 MRPL39Q9NYK5 338 aaKnown RBP17.44■□□□□ 0.38
HLA-B-250ENST00000434333 ANGPT4Q9Y264 503 aa17.44■□□□□ 0.38
HLA-B-250ENST00000434333 RTTNQ86VV8 2226 aa17.43■□□□□ 0.38
HLA-B-250ENST00000434333 ZNF99A8MXY4 864 aaPredicted RBP17.43■□□□□ 0.38
HLA-B-250ENST00000434333 B9A039 149 aa17.43■□□□□ 0.38
HLA-B-250ENST00000434333 M0R3G1 203 aa17.43■□□□□ 0.38
HLA-B-250ENST00000434333 AKAP8O43823 692 aaKnown RBP17.43■□□□□ 0.38
HLA-B-250ENST00000434333 OPN1SWP03999 348 aa17.43■□□□□ 0.38
HLA-B-250ENST00000434333 IGHV4-31P0DP07 118 aa17.43■□□□□ 0.38
HLA-B-250ENST00000434333 NQO1P15559 274 aaKnown RBP17.43■□□□□ 0.38
HLA-B-250ENST00000434333 MTPNP58546 118 aa17.43■□□□□ 0.38
HLA-B-250ENST00000434333 POU3F1Q03052 451 aaPredicted RBP17.43■□□□□ 0.38
HLA-B-250ENST00000434333 RBBP4Q09028 425 aa17.43■□□□□ 0.38
HLA-B-250ENST00000434333 SWT1Q5T5J6 900 aaKnown RBP17.43■□□□□ 0.38
HLA-B-250ENST00000434333 MDP1Q86V88 176 aa17.43■□□□□ 0.38
HLA-B-250ENST00000434333 C20orf196Q8IYI0 205 aa17.43■□□□□ 0.38
HLA-B-250ENST00000434333 ANKS4BQ8N8V4 417 aa17.43■□□□□ 0.38
HLA-B-250ENST00000434333 C11orf65Q8NCR3 313 aa17.43■□□□□ 0.38
HLA-B-250ENST00000434333 OR4F15Q8NGB8 312 aa17.43■□□□□ 0.38
HLA-B-250ENST00000434333 RNF217Q8TC41 542 aa17.43■□□□□ 0.38
HLA-B-250ENST00000434333 TXNDC15Q96J42 360 aa17.43■□□□□ 0.38
HLA-B-250ENST00000434333 MAGEB18Q96M61 343 aa17.43■□□□□ 0.38
HLA-B-250ENST00000434333 CGREF1Q99674 301 aa17.43■□□□□ 0.38
HLA-B-250ENST00000434333 ZNF442Q9H7R0 627 aa17.43■□□□□ 0.38
HLA-B-250ENST00000434333 EVA1AQ9H8M9 152 aa17.43■□□□□ 0.38
HLA-B-250ENST00000434333 NDUFAF1Q9Y375 327 aa17.43■□□□□ 0.38
HLA-B-250ENST00000434333 FKBP7Q9Y680 259 aa17.43■□□□□ 0.38
HLA-B-250ENST00000434333 IGHV2OR16-5A0A0B4J2B6 119 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 SLC35F4A4IF30 521 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 FMO6PO60774 539 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 LYPD3O95274 346 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 THY1P04216 161 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 USF1P22415 310 aaPredicted RBP17.42■□□□□ 0.38
HLA-B-250ENST00000434333 PDLIM4P50479 330 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 IL1RL1Q01638 556 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 CHRFAM7AQ494W8 412 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 CARD17Q5XLA6 110 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 ZNF613Q6PF04 617 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 WDR88Q6ZMY6 472 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 ZNF627Q7L945 461 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 RANBP3LQ86VV4 465 aaPredicted RBP17.42■□□□□ 0.38
HLA-B-250ENST00000434333 TSPYL5Q86VY4 417 aaPredicted RBP17.42■□□□□ 0.38
HLA-B-250ENST00000434333 OR4D11Q8NGI4 311 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 LRR1Q96L50 414 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 ZNF75AQ96N20 296 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 MCHR1Q99705 422 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 ASPNQ9BXN1 380 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 NOX3Q9HBY0 568 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 B3GNT2Q9NY97 397 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 SELENONQ9NZV5 590 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 SLC13A4Q9UKG4 626 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 MXRA5Q9NR99 2828 aa17.42■□□□□ 0.38
HLA-B-250ENST00000434333 SVEP1Q4LDE5 3571 aa17.41■□□□□ 0.38
HLA-B-250ENST00000434333 HMGB1P1B2RPK0 211 aaPredicted RBP17.41■□□□□ 0.38
HLA-B-250ENST00000434333 M0QX08 132 aa17.41■□□□□ 0.38
HLA-B-250ENST00000434333 NDUFS8O00217 210 aa17.41■□□□□ 0.38
HLA-B-250ENST00000434333 PLPP3O14495 311 aa17.41■□□□□ 0.38
HLA-B-250ENST00000434333 IGFBP1P08833 259 aaPredicted RBP17.41■□□□□ 0.38
HLA-B-250ENST00000434333 ZNF16P17020 682 aaPredicted RBP17.41■□□□□ 0.38
HLA-B-250ENST00000434333 THBS4P35443 961 aa17.41■□□□□ 0.38
HLA-B-250ENST00000434333 ARR3P36575 388 aa17.41■□□□□ 0.38
HLA-B-250ENST00000434333 NR4A2P43354 598 aa17.41■□□□□ 0.38
HLA-B-250ENST00000434333 PPOXP50336 477 aa17.41■□□□□ 0.38
HLA-B-250ENST00000434333 LSM11P83369 360 aaKnown RBP eCLIP17.41■□□□□ 0.38
HLA-B-250ENST00000434333 PUDPQ08623 228 aa17.41■□□□□ 0.38
HLA-B-250ENST00000434333 PMS2P3Q13401 168 aa17.41■□□□□ 0.38
HLA-B-250ENST00000434333 SLC46A3Q7Z3Q1 461 aa17.41■□□□□ 0.38
HLA-B-250ENST00000434333 RBM45Q8IUH3 476 aaKnown RBP17.41■□□□□ 0.38
HLA-B-250ENST00000434333 OR6T1Q8NGN1 323 aa17.41■□□□□ 0.38
HLA-B-250ENST00000434333 VRK1Q99986 396 aaPredicted RBP17.41■□□□□ 0.38
HLA-B-250ENST00000434333 KAT8Q9H7Z6 458 aaKnown RBP17.41■□□□□ 0.38
HLA-B-250ENST00000434333 TMEM160Q9NX00 188 aa17.41■□□□□ 0.38
HLA-B-250ENST00000434333 NOX1Q9Y5S8 564 aa17.41■□□□□ 0.38
HLA-B-250ENST00000434333 TMEM129A0AVI4 362 aa17.4■□□□□ 0.38
HLA-B-250ENST00000434333 CHP2O43745 196 aa17.4■□□□□ 0.38
HLA-B-250ENST00000434333 EDF1O60869 148 aaKnown RBP17.4■□□□□ 0.38
HLA-B-250ENST00000434333 C8BP07358 591 aa17.4■□□□□ 0.38
HLA-B-250ENST00000434333 CD247P20963 164 aa17.4■□□□□ 0.38
HLA-B-250ENST00000434333 NPRL3Q12980 569 aa17.4■□□□□ 0.38
HLA-B-250ENST00000434333 CYP51A1Q16850 503 aa17.4■□□□□ 0.38
HLA-B-250ENST00000434333 ENTPD8Q5MY95 495 aa17.4■□□□□ 0.38
HLA-B-250ENST00000434333 PODNL1Q6PEZ8 512 aa17.4■□□□□ 0.38
HLA-B-250ENST00000434333 PXKQ7Z7A4 578 aa17.4■□□□□ 0.38
HLA-B-250ENST00000434333 CCDC36Q8IYA8 594 aa17.4■□□□□ 0.38
HLA-B-250ENST00000434333 SPATA3Q8NHX4 192 aa17.4■□□□□ 0.38
HLA-B-250ENST00000434333 TSPEARQ8WU66 669 aa17.4■□□□□ 0.38
HLA-B-250ENST00000434333 DOK1Q99704 481 aa17.4■□□□□ 0.38
HLA-B-250ENST00000434333 ZNF224Q9NZL3 707 aa17.4■□□□□ 0.38
HLA-B-250ENST00000434333 USP22Q9UPT9 525 aa17.4■□□□□ 0.38
HLA-B-250ENST00000434333 MALRD1Q5VYJ5 2156 aa17.39■□□□□ 0.37
HLA-B-250ENST00000434333 ANGPT2O15123 496 aa17.39■□□□□ 0.37
HLA-B-250ENST00000434333 MT-ATP6P00846 226 aa17.39■□□□□ 0.37
HLA-B-250ENST00000434333 HLA-HP01893 362 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms