RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 HSPA13P48723 471 aa12.7□□□□□ -0.38
LAMA4-208ENST00000431543 RAC3P60763 192 aa12.7□□□□□ -0.38
LAMA4-208ENST00000431543 PRPS1P60891 318 aa12.7□□□□□ -0.38
LAMA4-208ENST00000431543 ESRRGP62508 458 aa12.7□□□□□ -0.38
LAMA4-208ENST00000431543 PMS2P3Q13401 168 aa12.7□□□□□ -0.38
LAMA4-208ENST00000431543 ZNF239Q16600 458 aaKnown RBP12.7□□□□□ -0.38
LAMA4-208ENST00000431543 ZBED5Q49AG3 693 aa12.7□□□□□ -0.38
LAMA4-208ENST00000431543 RASSF6Q6ZTQ3 369 aa12.7□□□□□ -0.38
LAMA4-208ENST00000431543 H1FNTQ75WM6 255 aaPredicted RBP12.7□□□□□ -0.38
LAMA4-208ENST00000431543 NANOGNBQ7Z5D8 188 aa12.7□□□□□ -0.38
LAMA4-208ENST00000431543 EPHX4Q8IUS5 362 aa12.7□□□□□ -0.38
LAMA4-208ENST00000431543 SLC43A2Q8N370 569 aa12.7□□□□□ -0.38
LAMA4-208ENST00000431543 SCAIQ8N9R8 606 aa12.7□□□□□ -0.38
LAMA4-208ENST00000431543 ZNF610Q8N9Z0 462 aa12.7□□□□□ -0.38
LAMA4-208ENST00000431543 ZNF555Q8NEP9 628 aa12.7□□□□□ -0.38
LAMA4-208ENST00000431543 ABHD3Q8WU67 409 aa12.7□□□□□ -0.38
LAMA4-208ENST00000431543 ARL5BQ96KC2 179 aa12.7□□□□□ -0.38
LAMA4-208ENST00000431543 SLC29A1Q99808 456 aa12.7□□□□□ -0.38
LAMA4-208ENST00000431543 NIPSNAP1Q9BPW8 284 aa12.7□□□□□ -0.38
LAMA4-208ENST00000431543 PIGMQ9H3S5 423 aa12.7□□□□□ -0.38
LAMA4-208ENST00000431543 GALNT8Q9NY28 637 aa12.7□□□□□ -0.38
LAMA4-208ENST00000431543 SMPD3Q9NY59 655 aaPredicted RBP12.7□□□□□ -0.38
LAMA4-208ENST00000431543 MCTS1Q9ULC4 181 aaKnown RBP12.7□□□□□ -0.38
LAMA4-208ENST00000431543 B3GALT5Q9Y2C3 310 aa12.7□□□□□ -0.38
LAMA4-208ENST00000431543 BLOC1S5-TXNDC5H3BN57 136 aa12.69□□□□□ -0.38
LAMA4-208ENST00000431543 BGLAPP02818 100 aa12.69□□□□□ -0.38
LAMA4-208ENST00000431543 ZNF26P17031 533 aaPredicted RBP12.69□□□□□ -0.38
LAMA4-208ENST00000431543 GRPRP30550 384 aa12.69□□□□□ -0.38
LAMA4-208ENST00000431543 KIR2DL3P43628 341 aa12.69□□□□□ -0.38
LAMA4-208ENST00000431543 DIO1P49895 249 aa12.69□□□□□ -0.38
LAMA4-208ENST00000431543 LSM11P83369 360 aaKnown RBP eCLIP12.69□□□□□ -0.38
LAMA4-208ENST00000431543 TLE4Q04727 773 aa12.69□□□□□ -0.38
LAMA4-208ENST00000431543 EEF1A1P5Q5VTE0 462 aa12.69□□□□□ -0.38
LAMA4-208ENST00000431543 ZNF474Q6S9Z5 364 aaPredicted RBP12.69□□□□□ -0.38
LAMA4-208ENST00000431543 SMARCD3Q6STE5 483 aa12.69□□□□□ -0.38
LAMA4-208ENST00000431543 FAM214BQ7L5A3 538 aa12.69□□□□□ -0.38
LAMA4-208ENST00000431543 GALNT5Q7Z7M9 940 aa12.69□□□□□ -0.38
LAMA4-208ENST00000431543 PARP8Q8N3A8 854 aa12.69□□□□□ -0.38
LAMA4-208ENST00000431543 CLDN22Q8N7P3 220 aa12.69□□□□□ -0.38
LAMA4-208ENST00000431543 OR52L1Q8NGH7 329 aa12.69□□□□□ -0.38
LAMA4-208ENST00000431543 OR5J2Q8NH18 312 aa12.69□□□□□ -0.38
LAMA4-208ENST00000431543 OR51A7Q8NH64 312 aa12.69□□□□□ -0.38
LAMA4-208ENST00000431543 LINC01560Q8TB33 94 aa12.69□□□□□ -0.38
LAMA4-208ENST00000431543 TEX47Q8TBZ9 253 aa12.69□□□□□ -0.38
LAMA4-208ENST00000431543 NRG4Q8WWG1 115 aa12.69□□□□□ -0.38
LAMA4-208ENST00000431543 CPNE4Q96A23 557 aaPredicted RBP12.69□□□□□ -0.38
LAMA4-208ENST00000431543 PTDSS2Q9BVG9 487 aa12.69□□□□□ -0.38
LAMA4-208ENST00000431543 MRPL39Q9NYK5 338 aaKnown RBP12.69□□□□□ -0.38
LAMA4-208ENST00000431543 CRIM1Q9NZV1 1036 aa12.69□□□□□ -0.38
LAMA4-208ENST00000431543 KLF4O43474 513 aa12.68□□□□□ -0.38
LAMA4-208ENST00000431543 NDUFB2O95178 105 aa12.68□□□□□ -0.38
LAMA4-208ENST00000431543 VAMP5O95183 116 aa12.68□□□□□ -0.38
LAMA4-208ENST00000431543 PLGP00747 810 aaPredicted RBP12.68□□□□□ -0.38
LAMA4-208ENST00000431543 ASAH2BP0C7U1 165 aa12.68□□□□□ -0.38
LAMA4-208ENST00000431543 IMPDH2P12268 514 aa12.68□□□□□ -0.38
LAMA4-208ENST00000431543 FCGR2AP12318 317 aa12.68□□□□□ -0.38
LAMA4-208ENST00000431543 AHCYP23526 432 aa12.68□□□□□ -0.38
LAMA4-208ENST00000431543 POU1F1P28069 291 aa12.68□□□□□ -0.38
LAMA4-208ENST00000431543 RPL4P36578 427 aaKnown RBP12.68□□□□□ -0.38
LAMA4-208ENST00000431543 FAM27E3Q08E93 113 aa12.68□□□□□ -0.38
LAMA4-208ENST00000431543 GTF2IRD2BQ6EKJ0 949 aa12.68□□□□□ -0.38
LAMA4-208ENST00000431543 TMEM225Q6GV28 225 aa12.68□□□□□ -0.38
LAMA4-208ENST00000431543 KLHL17Q6TDP4 642 aa12.68□□□□□ -0.38
LAMA4-208ENST00000431543 GTF2IRD2Q86UP8 949 aa12.68□□□□□ -0.38
LAMA4-208ENST00000431543 MEX3DQ86XN8 651 aaKnown RBP12.68□□□□□ -0.38
LAMA4-208ENST00000431543 RNF128Q8TEB7 428 aa12.68□□□□□ -0.38
LAMA4-208ENST00000431543 ZNF775Q96BV0 537 aaPredicted RBP12.68□□□□□ -0.38
LAMA4-208ENST00000431543 C14orf79Q96F83 325 aa12.68□□□□□ -0.38
LAMA4-208ENST00000431543 GMPPAQ96IJ6 420 aaPredicted RBP12.68□□□□□ -0.38
LAMA4-208ENST00000431543 TNFRSF13CQ96RJ3 184 aa12.68□□□□□ -0.38
LAMA4-208ENST00000431543 RIBC2Q9H4K1 309 aa12.68□□□□□ -0.38
LAMA4-208ENST00000431543 KCNN3Q9UGI6 736 aa12.68□□□□□ -0.38
LAMA4-208ENST00000431543 FOXD3Q9UJU5 478 aaPredicted RBP12.68□□□□□ -0.38
LAMA4-208ENST00000431543 CDH10Q9Y6N8 788 aa12.68□□□□□ -0.38
LAMA4-208ENST00000431543 MPDZO75970 2070 aa12.68□□□□□ -0.38
LAMA4-208ENST00000431543 HRNRQ86YZ3 2850 aaPredicted RBP12.67□□□□□ -0.38
LAMA4-208ENST00000431543 FTCDNL1E5RQL4 147 aa12.67□□□□□ -0.38
LAMA4-208ENST00000431543 LRRN3E7EW58 273 aa12.67□□□□□ -0.38
LAMA4-208ENST00000431543 CDC42EP2O14613 210 aa12.67□□□□□ -0.38
LAMA4-208ENST00000431543 MSTNO14793 375 aa12.67□□□□□ -0.38
LAMA4-208ENST00000431543 SMAD9O15198 467 aaKnown RBP12.67□□□□□ -0.38
LAMA4-208ENST00000431543 RNF13O43567 381 aa12.67□□□□□ -0.38
LAMA4-208ENST00000431543 SS18L1O75177 396 aaPredicted RBP12.67□□□□□ -0.38
LAMA4-208ENST00000431543 PTP4A3O75365 173 aa12.67□□□□□ -0.38
LAMA4-208ENST00000431543 CD8BP10966 210 aa12.67□□□□□ -0.38
LAMA4-208ENST00000431543 SSTR2P30874 369 aa12.67□□□□□ -0.38
LAMA4-208ENST00000431543 SLC6A6P31641 620 aa12.67□□□□□ -0.38
LAMA4-208ENST00000431543 CRISP1P54107 249 aa12.67□□□□□ -0.38
LAMA4-208ENST00000431543 LTBQ06643 244 aa12.67□□□□□ -0.38
LAMA4-208ENST00000431543 C1DQ13901 141 aaKnown RBP12.67□□□□□ -0.38
LAMA4-208ENST00000431543 ALG10Q5BKT4 473 aa12.67□□□□□ -0.38
LAMA4-208ENST00000431543 TTC23Q5W5X9 447 aa12.67□□□□□ -0.38
LAMA4-208ENST00000431543 PAQR6Q6TCH4 344 aa12.67□□□□□ -0.38
LAMA4-208ENST00000431543 IZUMO2Q6UXV1 221 aa12.67□□□□□ -0.38
LAMA4-208ENST00000431543 FCRLAQ7L513 359 aa12.67□□□□□ -0.38
LAMA4-208ENST00000431543 SLC46A3Q7Z3Q1 461 aa12.67□□□□□ -0.38
LAMA4-208ENST00000431543 NUFIP2Q7Z417 695 aaKnown RBP12.67□□□□□ -0.38
LAMA4-208ENST00000431543 TUSC5Q8IXB3 177 aa12.67□□□□□ -0.38
LAMA4-208ENST00000431543 DHRSXQ8N5I4 330 aa12.67□□□□□ -0.38
LAMA4-208ENST00000431543 LRRC17Q8N6Y2 441 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms