RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 TPD52L3Q96J77 140 aa1.4□□□□□ -2.19
CDC40-204ENST00000431461 SLC38A2Q96QD8 506 aa1.4□□□□□ -2.19
CDC40-204ENST00000431461 PLEKHF1Q96S99 279 aa1.4□□□□□ -2.19
CDC40-204ENST00000431461 TBX15Q96SF7 602 aa1.4□□□□□ -2.19
CDC40-204ENST00000431461 SORT1Q99523 831 aa1.4□□□□□ -2.19
CDC40-204ENST00000431461 NPAS2Q99743 824 aa1.4□□□□□ -2.19
CDC40-204ENST00000431461 MRPL45Q9BRJ2 306 aaKnown RBP1.4□□□□□ -2.19
CDC40-204ENST00000431461 NAT9Q9BTE0 207 aa1.4□□□□□ -2.19
CDC40-204ENST00000431461 HES7Q9BYE0 225 aa1.4□□□□□ -2.19
CDC40-204ENST00000431461 ACTR6Q9GZN1 396 aa1.4□□□□□ -2.19
CDC40-204ENST00000431461 NXF3Q9H4D5 531 aaKnown RBP1.4□□□□□ -2.19
CDC40-204ENST00000431461 GORASP2Q9H8Y8 452 aa1.4□□□□□ -2.19
CDC40-204ENST00000431461 NMRAL1Q9HBL8 299 aa1.4□□□□□ -2.19
CDC40-204ENST00000431461 NT5MQ9NPB1 228 aa1.4□□□□□ -2.19
CDC40-204ENST00000431461 LHX9Q9NQ69 397 aa1.4□□□□□ -2.19
CDC40-204ENST00000431461 ZNF331Q9NQX6 463 aaPredicted RBP1.4□□□□□ -2.19
CDC40-204ENST00000431461 CTPS2Q9NRF8 586 aa1.4□□□□□ -2.19
CDC40-204ENST00000431461 KLK12Q9UKR0 248 aa1.4□□□□□ -2.19
CDC40-204ENST00000431461 TMCC3Q9ULS5 477 aa1.4□□□□□ -2.19
CDC40-204ENST00000431461 WSB1Q9Y6I7 421 aa1.4□□□□□ -2.19
CDC40-204ENST00000431461 FRMPD3Q5JV73 1810 aa1.4□□□□□ -2.19
CDC40-204ENST00000431461 GTF3C1Q12789 2109 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.39□□□□□ -2.19
CDC40-204ENST00000431461 C12orf77C9JDV5 145 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 HAS3O00219 553 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 CXCL11O14625 94 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 FCMRO60667 390 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 SPAG7O75391 227 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 CSF3P09919 207 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 GKN3PP0CG01 181 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 TROVE2P10155 538 aaKnown RBP eCLIP1.39□□□□□ -2.19
CDC40-204ENST00000431461 NCF2P19878 526 aaPredicted RBP1.39□□□□□ -2.19
CDC40-204ENST00000431461 GPR6P46095 362 aaPredicted RBP1.39□□□□□ -2.19
CDC40-204ENST00000431461 NMUP48645 174 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 UBE2AP49459 152 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 SUB1P53999 127 aaKnown RBP eCLIP1.39□□□□□ -2.19
CDC40-204ENST00000431461 AIF1P55008 147 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 FBXW4P57775 412 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 CDK16Q00536 496 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 HMGCS1Q01581 520 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 LRRC63Q05C16 580 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 ENPEPQ07075 957 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 GGTLC2Q14390 218 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 KIAA0087Q14695 138 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 ZMYND11Q15326 602 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 BCL7AQ4VC05 210 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 CARD16Q5EG05 197 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 THEM4Q5T1C6 240 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 GPRC6AQ5T6X5 926 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 FAM71E1Q6IPT2 247 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 KDELC1Q6UW63 502 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 ENPP6Q6UWR7 440 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 LRRC31Q6UY01 552 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 BHLHA15Q7RTS1 189 aaPredicted RBP1.39□□□□□ -2.19
CDC40-204ENST00000431461 EGFL6Q8IUX8 553 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 PCP2Q8IVA1 136 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 UBE2J2Q8N2K1 259 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 C6orf223Q8N319 242 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 ZCCHC7Q8N3Z6 543 aaKnown RBP1.39□□□□□ -2.19
CDC40-204ENST00000431461 ARIH2OSQ8N7S6 290 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 ACOT4Q8N9L9 421 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 EIF1ADQ8N9N8 165 aaKnown RBP1.39□□□□□ -2.19
CDC40-204ENST00000431461 CATSPER1Q8NEC5 780 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 DUSP18Q8NEJ0 188 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 OR4F15Q8NGB8 312 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 OR52H1Q8NGJ2 320 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 OR13C2Q8NGS9 318 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 GPR151Q8TDV0 419 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 SCFD1Q8WVM8 642 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 ARPC1AQ92747 370 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 FGF11Q92914 225 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 SMARCD2Q92925 531 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 STARD4Q96DR4 205 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 TIMD4Q96H15 378 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 HSFY1Q96LI6 401 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 TSNARE1Q96NA8 513 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 TSSK3Q96PN8 268 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 CNN2Q99439 309 aaKnown RBP1.39□□□□□ -2.19
CDC40-204ENST00000431461 PPA2Q9H2U2 334 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 ANKRD19PQ9H560 264 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 DMAP1Q9NPF5 467 aaPredicted RBP1.39□□□□□ -2.19
CDC40-204ENST00000431461 CCL28Q9NRJ3 127 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 FAM49BQ9NUQ9 324 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 CALYQ9NYX4 217 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 SLC25A37Q9NYZ2 338 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 XCL2Q9UBD3 114 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 PCYOX1Q9UHG3 505 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 PACSIN2Q9UNF0 486 aaPredicted RBP1.39□□□□□ -2.19
CDC40-204ENST00000431461 KCNIP3Q9Y2W7 256 aa1.39□□□□□ -2.19
CDC40-204ENST00000431461 RLFQ13129 1914 aa1.38□□□□□ -2.19
CDC40-204ENST00000431461 ATAD2BQ9ULI0 1458 aa1.38□□□□□ -2.19
CDC40-204ENST00000431461 CDC42BPBQ9Y5S2 1711 aa1.38□□□□□ -2.19
CDC40-204ENST00000431461 IGKV2-28A0A075B6P5 120 aa1.38□□□□□ -2.19
CDC40-204ENST00000431461 IGKV2D-24A0A075B6R9 120 aa1.38□□□□□ -2.19
CDC40-204ENST00000431461 NSG1A0A0A6YYJ2 146 aa1.38□□□□□ -2.19
CDC40-204ENST00000431461 PRSS37A4D1T9 235 aa1.38□□□□□ -2.19
CDC40-204ENST00000431461 HSD17B6O14756 317 aa1.38□□□□□ -2.19
CDC40-204ENST00000431461 B4GALT2O60909 372 aa1.38□□□□□ -2.19
CDC40-204ENST00000431461 EIF3GO75821 320 aaKnown RBP eCLIP1.38□□□□□ -2.19
CDC40-204ENST00000431461 IGKV2D-28P01615 120 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms