RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 SLC15A1P46059 708 aa16.33■□□□□ 0.2
HMGN1-206ENST00000431390 P2RY4P51582 365 aa16.33■□□□□ 0.2
HMGN1-206ENST00000431390 CDH15P55291 814 aa16.33■□□□□ 0.2
HMGN1-206ENST00000431390 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.33■□□□□ 0.2
HMGN1-206ENST00000431390 ITGADQ13349 1161 aa16.33■□□□□ 0.2
HMGN1-206ENST00000431390 ZNF773Q6PK81 442 aa16.33■□□□□ 0.2
HMGN1-206ENST00000431390 Q6ZS92 163 aa16.33■□□□□ 0.2
HMGN1-206ENST00000431390 ASB18Q6ZVZ8 466 aa16.33■□□□□ 0.2
HMGN1-206ENST00000431390 BCDIN3DQ7Z5W3 292 aaKnown RBP16.33■□□□□ 0.2
HMGN1-206ENST00000431390 PXKQ7Z7A4 578 aa16.33■□□□□ 0.2
HMGN1-206ENST00000431390 CPOQ8IVL8 374 aa16.33■□□□□ 0.2
HMGN1-206ENST00000431390 GID4Q8IVV7 300 aa16.33■□□□□ 0.2
HMGN1-206ENST00000431390 TMEM99Q8N816 258 aa16.33■□□□□ 0.2
HMGN1-206ENST00000431390 OR52E2Q8NGJ4 325 aa16.33■□□□□ 0.2
HMGN1-206ENST00000431390 Q96M85 177 aa16.33■□□□□ 0.2
HMGN1-206ENST00000431390 TSPAN32Q96QS1 320 aa16.33■□□□□ 0.2
HMGN1-206ENST00000431390 TXNIPQ9H3M7 391 aa16.33■□□□□ 0.2
HMGN1-206ENST00000431390 PAK1IP1Q9NWT1 392 aaPredicted RBP16.33■□□□□ 0.2
HMGN1-206ENST00000431390 ZNF346Q9UL40 294 aaKnown RBP16.33■□□□□ 0.2
HMGN1-206ENST00000431390 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.33■□□□□ 0.2
HMGN1-206ENST00000431390 TEX13CA0A0J9YWL9 993 aa16.32■□□□□ 0.2
HMGN1-206ENST00000431390 A0A1W2PRG6 482 aa16.32■□□□□ 0.2
HMGN1-206ENST00000431390 EFCAB10A6NFE3 127 aa16.32■□□□□ 0.2
HMGN1-206ENST00000431390 AQP7P3A6NL99 342 aa16.32■□□□□ 0.2
HMGN1-206ENST00000431390 PTGES3LE9PB15 166 aa16.32■□□□□ 0.2
HMGN1-206ENST00000431390 DBTP11182 482 aaKnown RBP16.32■□□□□ 0.2
HMGN1-206ENST00000431390 CLDN20P56880 219 aa16.32■□□□□ 0.2
HMGN1-206ENST00000431390 RAC3P60763 192 aa16.32■□□□□ 0.2
HMGN1-206ENST00000431390 RPL27P61353 136 aaKnown RBP16.32■□□□□ 0.2
HMGN1-206ENST00000431390 H3F3AP84243 136 aa16.32■□□□□ 0.2
HMGN1-206ENST00000431390 CRMP1Q14194 572 aa16.32■□□□□ 0.2
HMGN1-206ENST00000431390 PDSS1Q5T2R2 415 aa16.32■□□□□ 0.2
HMGN1-206ENST00000431390 SLC37A3Q8NCC5 494 aa16.32■□□□□ 0.2
HMGN1-206ENST00000431390 SDR9C7Q8NEX9 313 aa16.32■□□□□ 0.2
HMGN1-206ENST00000431390 OR4K13Q8NH42 304 aa16.32■□□□□ 0.2
HMGN1-206ENST00000431390 GGHQ92820 318 aa16.32■□□□□ 0.2
HMGN1-206ENST00000431390 RASD2Q96D21 266 aa16.32■□□□□ 0.2
HMGN1-206ENST00000431390 ZHX1-C8orf76Q96EF9 292 aa16.32■□□□□ 0.2
HMGN1-206ENST00000431390 ADGRG7Q96K78 797 aa16.32■□□□□ 0.2
HMGN1-206ENST00000431390 NAA11Q9BSU3 229 aaPredicted RBP16.32■□□□□ 0.2
HMGN1-206ENST00000431390 SLC6A15Q9H2J7 730 aa16.32■□□□□ 0.2
HMGN1-206ENST00000431390 AMBNQ9NP70 447 aa16.32■□□□□ 0.2
HMGN1-206ENST00000431390 H2AFY2Q9P0M6 372 aaPredicted RBP16.32■□□□□ 0.2
HMGN1-206ENST00000431390 MED12Q93074 2177 aa16.32■□□□□ 0.2
HMGN1-206ENST00000431390 LOC102725191A0A1B0GVB3 256 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 TNFSF11O14788 317 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 CLPTM1O96005 669 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 ACTL6AO96019 429 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 PDGFAP04085 211 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 ACVR2AP27037 513 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 CDH11P55287 796 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 ZNF91Q05481 1191 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 KRR1Q13601 381 aaKnown RBP16.31■□□□□ 0.2
HMGN1-206ENST00000431390 BCL2A1Q16548 175 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 ACKR1Q16570 336 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 RNFT1Q5M7Z0 435 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 PLBD1Q6P4A8 553 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 AHSA2Q719I0 299 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 JAZF1Q86VZ6 243 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 ARIH2OSQ8N7S6 290 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 NPEPL1Q8NDH3 523 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 OR2V1Q8NHB1 315 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 PTP4A1Q93096 173 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 MYDGFQ969H8 173 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 DDOQ99489 341 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 COPS4Q9BT78 406 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 MRPS18AQ9NVS2 196 aaKnown RBP16.31■□□□□ 0.2
HMGN1-206ENST00000431390 RASD1Q9Y272 281 aa16.31■□□□□ 0.2
HMGN1-206ENST00000431390 IRGMA1A4Y4 181 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 FAM183AA6NL82 134 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 EIF1AYO14602 144 aaKnown RBP16.3■□□□□ 0.2
HMGN1-206ENST00000431390 RGS10O43665 173 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 VAMP5O95183 116 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 HTR1AP08908 422 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 ATP6V1B1P15313 513 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 ZNF24P17028 368 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 HTR1FP30939 366 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 STARP49675 285 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 LHX2P50458 406 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 DAP3P51398 398 aaKnown RBP16.3■□□□□ 0.2
HMGN1-206ENST00000431390 AGFG1P52594 562 aaKnown RBP16.3■□□□□ 0.2
HMGN1-206ENST00000431390 TMED1Q13445 227 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 MESTQ5EB52 335 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 FAM205BPQ63HN1 556 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 HBMQ6B0K9 141 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 NIPAL3Q6P499 406 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 TRILQ7L0X0 811 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 PRSS48Q7RTY5 328 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 ADCK1Q86TW2 530 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 NEIL3Q8TAT5 605 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 ZNF519Q8TB69 540 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 SGCDQ92629 289 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 OXGR1Q96P68 337 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 SNX18Q96RF0 628 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 SIGLEC11Q96RL6 698 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 RHNO1Q9BSD3 238 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 B3GAT1Q9P2W7 334 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 NOX1Q9Y5S8 564 aa16.3■□□□□ 0.2
HMGN1-206ENST00000431390 TFECO14948 347 aaPredicted RBP16.3■□□□□ 0.2
HMGN1-206ENST00000431390 PLGP00747 810 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms