RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 SNRPGP15A8MWD9 76 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 H3BUI4 141 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 PDGFAP04085 211 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 GALNSP34059 522 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 MECP2P51608 486 aaKnown RBP10.3□□□□□ -0.76
USP4-205ENST00000431357 DHODHQ02127 395 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 FUT7Q11130 342 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 BIKQ13323 160 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 EXOSC2Q13868 293 aaKnown RBP10.3□□□□□ -0.76
USP4-205ENST00000431357 PRTGQ2VWP7 1150 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 KLHL26Q53HC5 615 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 IGSF11Q5DX21 431 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 MTFR2Q6P444 385 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 STAC2Q6ZMT1 411 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 NUP54Q7Z3B4 507 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 MCATQ8IVS2 390 aaKnown RBP10.3□□□□□ -0.76
USP4-205ENST00000431357 EXD3Q8N9H8 876 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 LRRC75AQ8NAA5 344 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 OR6C4Q8NGE1 309 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 MOSPD2Q8NHP6 518 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 ZPLD1Q8TCW7 415 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 RGP1Q92546 391 aaPredicted RBP10.3□□□□□ -0.76
USP4-205ENST00000431357 THRSPQ92748 146 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 PELOQ9BRX2 385 aaKnown RBP10.3□□□□□ -0.76
USP4-205ENST00000431357 OR10A5Q9H207 317 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 OR10A4Q9H209 315 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 METTL17Q9H7H0 456 aaPredicted RBP10.3□□□□□ -0.76
USP4-205ENST00000431357 NOX3Q9HBY0 568 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 FAM60AQ9NP50 221 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 MRPL15Q9P015 296 aaKnown RBP10.3□□□□□ -0.76
USP4-205ENST00000431357 GMEB2Q9UKD1 530 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 DTX4Q9Y2E6 619 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 FKBP7Q9Y680 259 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 IGKV1D-42A0A075B6H8 117 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 A0A0A6YYC8 382 aaPredicted RBP10.3□□□□□ -0.76
USP4-205ENST00000431357 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.3□□□□□ -0.76
USP4-205ENST00000431357 A0A1B0GVT2 93 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 TGFBR3LH3BV60 316 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 I3L1I5 382 aaPredicted RBP10.3□□□□□ -0.76
USP4-205ENST00000431357 ARPC1BO15143 372 aaKnown RBP10.3□□□□□ -0.76
USP4-205ENST00000431357 UPK3AO75631 287 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 GIPP09681 153 aaPredicted RBP10.3□□□□□ -0.76
USP4-205ENST00000431357 ST6GAL1P15907 406 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 SDHAP31040 664 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 CTHP32929 405 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 FAUP35544 74 aaKnown RBP10.3□□□□□ -0.76
USP4-205ENST00000431357 CDKN2AP42771 156 aaKnown RBP10.3□□□□□ -0.76
USP4-205ENST00000431357 VEGFCP49767 419 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 SELENOPP49908 381 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 P2RX1P51575 399 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 PUDPQ08623 228 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 ZNF74Q16587 644 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 COL13A1Q5TAT6 717 aaPredicted RBP10.3□□□□□ -0.76
USP4-205ENST00000431357 FAM122BQ7Z309 247 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 ATG4DQ86TL0 474 aaPredicted RBP10.3□□□□□ -0.76
USP4-205ENST00000431357 DND1Q8IYX4 353 aaKnown RBP10.3□□□□□ -0.76
USP4-205ENST00000431357 FTMTQ8N4E7 242 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 C19orf47Q8N9M1 422 aaKnown RBP10.3□□□□□ -0.76
USP4-205ENST00000431357 OR4C3Q8NH37 302 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 C16orf52Q8NHV5 167 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 RNF166Q96A37 237 aaPredicted RBP10.3□□□□□ -0.76
USP4-205ENST00000431357 Q96M85 177 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 IER2Q9BTL4 223 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 BEX1Q9HBH7 125 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 EXOSC3Q9NQT5 275 aaKnown RBP10.3□□□□□ -0.76
USP4-205ENST00000431357 FLVCR2Q9UPI3 526 aa10.3□□□□□ -0.76
USP4-205ENST00000431357 SCN2AQ99250 2005 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 RPS10-NUDT3A0A1W2PQS6 291 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 IDSB3KWA1 339 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 BLOC1S5-TXNDC5H3BN57 136 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 M0R233 179 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 HRKO00198 91 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 PHYHO14832 338 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 HCRTR1O43613 425 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 MPC2O95563 127 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 DRD1P21728 446 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 AQP2P41181 271 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 TPMTP51580 245 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 CTXN1P60606 82 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 GPR85P60893 370 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 RAP2BP61225 183 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 NDUFAF6Q330K2 333 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 ALG10Q5BKT4 473 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 LIPNQ5VXI9 398 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 ZNF704Q6ZNC4 412 aaPredicted RBP10.29□□□□□ -0.76
USP4-205ENST00000431357 DNM1P46Q6ZS02 220 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 Q6ZTK2 550 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 TAF8Q7Z7C8 310 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 CDC20BQ86Y33 519 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 MEIOBQ8N635 442 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 OR2T4Q8NH00 348 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 ZNF417Q8TAU3 575 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 TMPRSS13Q9BYE2 586 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 RBCK1Q9BYM8 510 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 COMMD4Q9H0A8 199 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 HCN3Q9P1Z3 774 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 MRM2Q9UI43 246 aaKnown RBP10.29□□□□□ -0.76
USP4-205ENST00000431357 ERVK-19Q9WJR5 959 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 TMEM14AQ9Y6G1 99 aa10.29□□□□□ -0.76
USP4-205ENST00000431357 FANCMQ8IYD8 2048 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms