RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 F13BP05160 661 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 FBXO45P0C2W1 286 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 PPA1Q15181 289 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 BCL2L15Q5TBC7 163 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 OR9K2Q8NGE7 335 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 OR13C2Q8NGS9 318 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 MUS81Q96NY9 551 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 TRBV4-1A0A0J9YWV2 114 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 HTR3BO95264 441 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 IL2RAP01589 272 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 TMPRSS3P57727 454 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 GLT8D1Q68CQ7 371 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 SFRP4Q6FHJ7 346 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-207ENST00000429896 BEST3Q8N1M1 668 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 KLHL9Q9P2J3 617 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 SCP2D1Q9UJQ7 156 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 LRRN3E7EW58 273 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 MT-ATP6P00846 226 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 MELKQ14680 651 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 PRICKLE2Q7Z3G6 844 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 ZBTB44Q8NCP5 570 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 ANKRD19PQ9H560 264 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 VSX1Q9NZR4 365 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-207ENST00000429896 CYC1P08574 325 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 FAM71F1Q96KD3 344 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-207ENST00000429896 PPP1R14DQ9NXH3 145 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 MYOTQ9UBF9 498 aa11.82□□□□□ -0.52
PTCH1-207ENST00000429896 ERGP11308 486 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 SFTPCP11686 197 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 ABCD3P28288 659 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 SUMO3P55854 103 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-207ENST00000429896 DSCR4P56555 118 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-207ENST00000429896 EIF5AP63241 154 aaKnown RBP11.81□□□□□ -0.52
PTCH1-207ENST00000429896 GNMTQ14749 295 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 NKPD1Q17RQ9 610 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 BORAQ6PGQ7 559 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 SLC35F2Q8IXU6 374 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 OR6T1Q8NGN1 323 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 HSPE1-MOB4S4R3N1 261 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 NUMA1Q14980 2115 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-207ENST00000429896 F5H5K5 113 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 SLC16A7O60669 478 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 PRR35P0CG20 571 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 ANXA3P12429 323 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 NAGAP17050 411 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 ZNF616Q08AN1 781 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 MAB21L1Q13394 359 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 FAM69AQ5T7M9 428 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 MRGPREQ86SM8 312 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 HS3ST5Q8IZT8 346 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 CYB561A3Q8NBI2 242 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 TMEM255BQ8WV15 326 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 MRGPRX4Q96LA9 322 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 ST6GALNAC5Q9BVH7 336 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 PCDHB16Q9NRJ7 776 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 LUZP4Q9P127 313 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 KLHL13Q9P2N7 655 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 UBE2J1Q9Y385 318 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-207ENST00000429896 CLCA1A8K7I4 914 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 FCMRO60667 390 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 KNG1P01042 644 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 TSPAN31Q12999 210 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 CPOQ8IVL8 374 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 C12orf49Q9H741 205 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 PLEKHA3Q9HB20 300 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 TAS2R3Q9NYW6 316 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 LOC102725191A0A1B0GVB3 256 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 RAB40ALP0C0E4 278 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 CSRP1P21291 193 aaKnown RBP11.81□□□□□ -0.52
PTCH1-207ENST00000429896 TBXA2RP21731 343 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 PYCR1P32322 319 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 HLCSP50747 726 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 GABARAPL2P60520 117 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 PM20D2Q8IYS1 436 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 SUCNR1Q9BXA5 334 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 SAP130Q9H0E3 1048 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 ZNF175Q9Y473 711 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 ZNF587BE7ETH6 402 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 LGI1O95970 557 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 TMEM225BP0DP42 221 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 ZNF182P17025 639 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-207ENST00000429896 BCL2L10Q9HD36 194 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 SLC25A37Q9NYZ2 338 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 MGAT4CQ9UBM8 478 aa11.81□□□□□ -0.52
PTCH1-207ENST00000429896 DOK2O60496 412 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 COL19A1Q14993 1142 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 TBRG1Q3YBR2 411 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 VASH1Q7L8A9 365 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-207ENST00000429896 APH1AQ96BI3 265 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 RP2O75695 350 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 H1FNTQ75WM6 255 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-207ENST00000429896 ZNF808Q8N4W9 903 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-207ENST00000429896 GRPEL2Q8TAA5 225 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 FNDC8Q8TC99 324 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 KCNIP3Q9Y2W7 256 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 ANKUB1A6NFN9 424 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 AGAP5A6NIR3 686 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 STSP08842 583 aa11.8□□□□□ -0.52
PTCH1-207ENST00000429896 GALNSP34059 522 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms