RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 RP1P56715 2156 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 RAB19A4D1S5 217 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 SCO2O43819 266 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 TBX19O60806 448 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 KRT33AO76009 404 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 SLC34A2O95436 690 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 IFNA7P01567 189 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 CELA2BP08218 269 aaPredicted RBP7.39□□□□□ -1.23
HPS4-205ENST00000429411 ADRB1P08588 477 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 SPARCP09486 303 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 TRAPPC2P0DI81 140 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 TRAPPC2BP0DI82 140 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 NPR2P20594 1047 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 G0S2P27469 103 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 PTH2RP49190 550 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 P2RX3P56373 397 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 DUSP8Q13202 625 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 CCINQ13939 588 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 ZIC1Q15915 447 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 DPY19L4Q7Z388 723 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 PAQR7Q86WK9 346 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 CMTM4Q8IZR5 234 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 JAGN1Q8N5M9 183 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 CHST4Q8NCG5 386 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 ZDHHC1Q8WTX9 485 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 HSD17B8Q92506 261 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 DVL3Q92997 716 aaPredicted RBP7.39□□□□□ -1.23
HPS4-205ENST00000429411 ADOQ96SZ5 270 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 ARL6Q9H0F7 186 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 NIPAL2Q9H841 368 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 LMAN1LQ9HAT1 526 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.39□□□□□ -1.23
HPS4-205ENST00000429411 KCNE5Q9UJ90 142 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 C19orf53Q9UNZ5 99 aaPredicted RBP7.39□□□□□ -1.23
HPS4-205ENST00000429411 SLC6A5Q9Y345 797 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 NUBP2Q9Y5Y2 271 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 TRAV18A0A075B6X5 111 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 CDC40O60508 579 aaKnown RBP eCLIP7.39□□□□□ -1.23
HPS4-205ENST00000429411 GTF2F2P13984 249 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 AKT2P31751 481 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 NRG3P56975 720 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 PCGF3Q3KNV8 242 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 KDM8Q8N371 416 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 LNX2Q8N448 690 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 NAXEQ8NCW5 288 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 OR11H7Q8NGC8 314 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 OR52B4Q8NGK2 314 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 OR4C3Q8NH37 302 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 NXPE2Q96DL1 559 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 PELI1Q96FA3 418 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 TGM7Q96PF1 710 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 SLC38A3Q99624 504 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 CBY1Q9Y3M2 126 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 SIT1Q9Y3P8 196 aa7.39□□□□□ -1.23
HPS4-205ENST00000429411 MTCL1Q9Y4B5 1905 aaKnown RBP7.39□□□□□ -1.23
HPS4-205ENST00000429411 DENND4CQ5VZ89 1909 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 OR6C65A6NJZ3 312 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 GMDSO60547 372 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 RGS11O94810 467 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 ST6GAL1P15907 406 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 DCTDP32321 178 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 ZNF85Q03923 595 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 C19orf57Q0VDD7 668 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 GRM7Q14831 915 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 KIR2DS3Q14952 304 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 ST3GAL2Q16842 350 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 ZNF658BQ4V348 819 aaPredicted RBP7.38□□□□□ -1.23
HPS4-205ENST00000429411 RPL13AP3Q6NVV1 102 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 DGAT2L6Q6ZPD8 337 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 TCTE3Q8IZS6 198 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 ZNF687Q8N1G0 1237 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 ZNF680Q8NEM1 530 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 OR13H1Q8NG92 308 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 SLC37A2Q8TED4 501 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 ATOH1Q92858 354 aaPredicted RBP7.38□□□□□ -1.23
HPS4-205ENST00000429411 AHCYL2Q96HN2 611 aaKnown RBP7.38□□□□□ -1.23
HPS4-205ENST00000429411 ZC3H10Q96K80 434 aaKnown RBP7.38□□□□□ -1.23
HPS4-205ENST00000429411 COMMD4Q9H0A8 199 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.38□□□□□ -1.23
HPS4-205ENST00000429411 ADGRL4Q9HBW9 690 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 NOX3Q9HBY0 568 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 PRDM9Q9NQV7 894 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 UBQLN2Q9UHD9 624 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 POLR1DQ9Y2S0 133 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 SLC22A7Q9Y694 548 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 DCDC2BA2VCK2 349 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 M0R296 226 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 SCDO00767 359 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 UBL3O95164 117 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 EGFP01133 1207 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 TNFP01375 233 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 HPXP02790 462 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 OPN1LWP04000 364 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 EPXP11678 715 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 SRMP19623 302 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 HNRNPA2B1P22626 353 aaKnown RBP7.38□□□□□ -1.23
HPS4-205ENST00000429411 SLC6A1P30531 599 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 MAP3K8P41279 467 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 AP3S2P59780 193 aa7.38□□□□□ -1.23
HPS4-205ENST00000429411 ACTA2P62736 377 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms