RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 GTF2IRD2Q86UP8 949 aa7.94□□□□□ -1.14
SMC6-204ENST00000428868 FAM109AQ8N4B1 249 aa7.94□□□□□ -1.14
SMC6-204ENST00000428868 EXD3Q8N9H8 876 aa7.94□□□□□ -1.14
SMC6-204ENST00000428868 SCAIQ8N9R8 606 aa7.94□□□□□ -1.14
SMC6-204ENST00000428868 FAM98AQ8NCA5 519 aaKnown RBP7.94□□□□□ -1.14
SMC6-204ENST00000428868 ZNF540Q8NDQ6 660 aa7.94□□□□□ -1.14
SMC6-204ENST00000428868 OR51L1Q8NGJ5 315 aa7.94□□□□□ -1.14
SMC6-204ENST00000428868 ZNF519Q8TB69 540 aa7.94□□□□□ -1.14
SMC6-204ENST00000428868 SMAP2Q8WU79 429 aaPredicted RBP7.94□□□□□ -1.14
SMC6-204ENST00000428868 TRUB1Q8WWH5 349 aaKnown RBP7.94□□□□□ -1.14
SMC6-204ENST00000428868 ASB10Q8WXI3 467 aa7.94□□□□□ -1.14
SMC6-204ENST00000428868 ZCCHC14Q8WYQ9 949 aaKnown RBP7.94□□□□□ -1.14
SMC6-204ENST00000428868 PTP4A1Q93096 173 aa7.94□□□□□ -1.14
SMC6-204ENST00000428868 ABHD17AQ96GS6 310 aa7.94□□□□□ -1.14
SMC6-204ENST00000428868 TXNDC15Q96J42 360 aa7.94□□□□□ -1.14
SMC6-204ENST00000428868 PLEKHA8Q96JA3 519 aa7.94□□□□□ -1.14
SMC6-204ENST00000428868 EMC6Q9BV81 110 aa7.94□□□□□ -1.14
SMC6-204ENST00000428868 YTHDF1Q9BYJ9 559 aaKnown RBP7.94□□□□□ -1.14
SMC6-204ENST00000428868 ZDHHC11Q9H8X9 412 aa7.94□□□□□ -1.14
SMC6-204ENST00000428868 PLCXD1Q9NUJ7 323 aa7.94□□□□□ -1.14
SMC6-204ENST00000428868 MED29Q9NX70 200 aa7.94□□□□□ -1.14
SMC6-204ENST00000428868 B4GALT7Q9UBV7 327 aa7.94□□□□□ -1.14
SMC6-204ENST00000428868 BAIAP2Q9UQB8 552 aa7.94□□□□□ -1.14
SMC6-204ENST00000428868 HDGFL3Q9Y3E1 203 aa7.94□□□□□ -1.14
SMC6-204ENST00000428868 CORINQ9Y5Q5 1042 aa7.94□□□□□ -1.14
SMC6-204ENST00000428868 DSPP15924 2871 aaKnown RBP7.93□□□□□ -1.14
SMC6-204ENST00000428868 INTS1Q8N201 2190 aaKnown RBP7.93□□□□□ -1.14
SMC6-204ENST00000428868 SHANK1Q9Y566 2161 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 CACNA1CQ13936 2221 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 IGKV1D-43A0A0B4J1Z2 117 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 A0A1W2PNV4 684 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 AQP7P3A6NL99 342 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 RIIAD1A6NNX1 92 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 FAM171A2A8MVW0 826 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 PRR23D1E9PI22 279 aaPredicted RBP7.93□□□□□ -1.14
SMC6-204ENST00000428868 PRODHO43272 600 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 TRAF3IP2O43734 574 aaPredicted RBP7.93□□□□□ -1.14
SMC6-204ENST00000428868 MPZL2O60487 215 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 STSP08842 583 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 PRR23D2P0DMB1 279 aaPredicted RBP7.93□□□□□ -1.14
SMC6-204ENST00000428868 PSKH1P11801 424 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 IFNGR1P15260 489 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 ZNF3P17036 446 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 PCMT1P22061 227 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 GTF2E2P29084 291 aaKnown RBP7.93□□□□□ -1.14
SMC6-204ENST00000428868 C21orf33P30042 268 aaPredicted RBP7.93□□□□□ -1.14
SMC6-204ENST00000428868 PYCR1P32322 319 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 ACVR1BP36896 505 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 CD79BP40259 229 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 CLK1P49759 484 aaKnown RBP7.93□□□□□ -1.14
SMC6-204ENST00000428868 MAP2K6P52564 334 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 CDH11P55287 796 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 RPL27P61353 136 aaKnown RBP7.93□□□□□ -1.14
SMC6-204ENST00000428868 H3F3AP84243 136 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 HSF1Q00613 529 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 SRYQ05066 204 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 ZNF239Q16600 458 aaKnown RBP7.93□□□□□ -1.14
SMC6-204ENST00000428868 LINC00303Q3SY05 128 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 ANKDD1AQ495B1 522 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 NADK2Q4G0N4 442 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 ARMC4Q5T2S8 1044 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 NXNL2Q5VZ03 156 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 HBMQ6B0K9 141 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 XAF1Q6GPH4 301 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 ZNF773Q6PK81 442 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 LRRC69Q6ZNQ3 347 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 Q6ZS92 163 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 SLC22A16Q86VW1 577 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 SIAH3Q8IW03 269 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 PM20D2Q8IYS1 436 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 SPARTQ8N0X7 666 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 SLC43A2Q8N370 569 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 ZADH2Q8N4Q0 377 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 ADPRHL1Q8NDY3 354 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 OR4F15Q8NGB8 312 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 OR52I1Q8NGK6 324 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 OR10D3Q8NH80 312 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 OR2V1Q8NHB1 315 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 ROBO4Q8WZ75 1007 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 TMIGD2Q96BF3 282 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 LGALS12Q96DT0 336 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 RNFT2Q96EX2 444 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 FOXN4Q96NZ1 517 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 MRPS26Q9BYN8 205 aaKnown RBP7.93□□□□□ -1.14
SMC6-204ENST00000428868 PRRG3Q9BZD7 231 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 NMNAT2Q9BZQ4 307 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 CCDC90BQ9GZT6 254 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 OR51V1Q9H2C8 321 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 TXNIPQ9H3M7 391 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 RPRD1BQ9NQG5 326 aaKnown RBP7.93□□□□□ -1.14
SMC6-204ENST00000428868 ASB6Q9NWX5 421 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 SCOCQ9UIL1 159 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 KLHL21Q9UJP4 597 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 TRAPPC4Q9Y296 219 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 PIEZO2Q9H5I5 2752 aa7.93□□□□□ -1.14
SMC6-204ENST00000428868 NBEAQ8NFP9 2946 aa7.92□□□□□ -1.14
SMC6-204ENST00000428868 A0A087WV48 116 aa7.92□□□□□ -1.14
SMC6-204ENST00000428868 A0A087WXM4 84 aa7.92□□□□□ -1.14
SMC6-204ENST00000428868 SH3D21A4FU49 640 aa7.92□□□□□ -1.14
SMC6-204ENST00000428868 DPPA5A6NC42 116 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms