RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 TMEM33P57088 247 aa15.72■□□□□ 0.11
UPK3BP1-201ENST00000428678 DSTNP60981 165 aa15.72■□□□□ 0.11
UPK3BP1-201ENST00000428678 RPS23P62266 143 aaKnown RBP15.72■□□□□ 0.11
UPK3BP1-201ENST00000428678 GALK2Q01415 458 aa15.72■□□□□ 0.11
UPK3BP1-201ENST00000428678 ZNF311Q5JNZ3 666 aa15.72■□□□□ 0.11
UPK3BP1-201ENST00000428678 PHYHD1Q5SRE7 291 aa15.72■□□□□ 0.11
UPK3BP1-201ENST00000428678 OGFOD2Q6N063 350 aa15.72■□□□□ 0.11
UPK3BP1-201ENST00000428678 ZNF813Q6ZN06 617 aa15.72■□□□□ 0.11
UPK3BP1-201ENST00000428678 LRP11Q86VZ4 500 aa15.72■□□□□ 0.11
UPK3BP1-201ENST00000428678 MGARPQ8TDB4 240 aa15.72■□□□□ 0.11
UPK3BP1-201ENST00000428678 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.72■□□□□ 0.11
UPK3BP1-201ENST00000428678 YIPF5Q969M3 257 aa15.72■□□□□ 0.11
UPK3BP1-201ENST00000428678 TMEM19Q96HH6 336 aa15.72■□□□□ 0.11
UPK3BP1-201ENST00000428678 MEAF6Q9HAF1 191 aa15.72■□□□□ 0.11
UPK3BP1-201ENST00000428678 SLC6A13Q9NSD5 602 aa15.72■□□□□ 0.11
UPK3BP1-201ENST00000428678 MYEF2Q9P2K5 600 aaKnown RBP15.72■□□□□ 0.11
UPK3BP1-201ENST00000428678 LOC105371242A0A075B767 164 aa15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 TRAV20A0A0B4J274 112 aa15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 A0A1W2PPW3 197 aa15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 TMEM247A6NEH6 219 aa15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 TRAF3IP2O43734 574 aaPredicted RBP15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 OR2T1O43869 369 aa15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 ZNF35P13682 527 aa15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 ZNF14P17017 642 aaPredicted RBP15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 GRPRP30550 384 aa15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 PTDSS1P48651 473 aaKnown RBP15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 MVDP53602 400 aa15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 LMO4P61968 165 aa15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 FAM69AQ5T7M9 428 aa15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 USP43Q70EL4 1123 aa15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 H1FNTQ75WM6 255 aaPredicted RBP15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 KIRREL3Q8IZU9 778 aa15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 SLC38A4Q969I6 547 aa15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 TAAR8Q969N4 342 aa15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 JMJD8Q96S16 334 aa15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 ZNF416Q9BWM5 594 aa15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 ROPN1BQ9BZX4 212 aaPredicted RBP15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 ROPN1Q9HAT0 212 aaPredicted RBP15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 PNPOQ9NVS9 261 aa15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 DUSP13Q9UII6 198 aa15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 POFUT2Q9Y2G5 429 aa15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 IFT52Q9Y366 437 aa15.71■□□□□ 0.11
UPK3BP1-201ENST00000428678 A0A0G2JPF8 293 aa15.7■□□□□ 0.1
UPK3BP1-201ENST00000428678 HNRNPCL2B2RXH8 293 aa15.7■□□□□ 0.1
UPK3BP1-201ENST00000428678 HNRNPCL3B7ZW38 293 aa15.7■□□□□ 0.1
UPK3BP1-201ENST00000428678 BIRC5O15392 142 aa15.7■□□□□ 0.1
UPK3BP1-201ENST00000428678 HNRNPCL1O60812 293 aaKnown RBP15.7■□□□□ 0.1
UPK3BP1-201ENST00000428678 NCR1O76036 304 aa15.7■□□□□ 0.1
UPK3BP1-201ENST00000428678 ANP32DO95626 131 aa15.7■□□□□ 0.1
UPK3BP1-201ENST00000428678 RAB36O95755 333 aa15.7■□□□□ 0.1
UPK3BP1-201ENST00000428678 HNRNPCL4P0DMR1 293 aa15.7■□□□□ 0.1
UPK3BP1-201ENST00000428678 NAT2P11245 290 aa15.7■□□□□ 0.1
UPK3BP1-201ENST00000428678 B4GALT1P15291 398 aa15.7■□□□□ 0.1
UPK3BP1-201ENST00000428678 NQO1P15559 274 aaKnown RBP15.7■□□□□ 0.1
UPK3BP1-201ENST00000428678 AQP5P55064 265 aa15.7■□□□□ 0.1
UPK3BP1-201ENST00000428678 MYBPC1Q00872 1141 aa15.7■□□□□ 0.1
UPK3BP1-201ENST00000428678 UEVLDQ8IX04 471 aa15.7■□□□□ 0.1
UPK3BP1-201ENST00000428678 C20orf196Q8IYI0 205 aa15.7■□□□□ 0.1
UPK3BP1-201ENST00000428678 TEX29Q8N6K0 151 aa15.7■□□□□ 0.1
UPK3BP1-201ENST00000428678 EMC6Q9BV81 110 aa15.7■□□□□ 0.1
UPK3BP1-201ENST00000428678 B3GAT2Q9NPZ5 323 aa15.7■□□□□ 0.1
UPK3BP1-201ENST00000428678 FZD7O75084 574 aa15.69■□□□□ 0.1
UPK3BP1-201ENST00000428678 BGNP21810 368 aa15.69■□□□□ 0.1
UPK3BP1-201ENST00000428678 GIPRP48546 466 aa15.69■□□□□ 0.1
UPK3BP1-201ENST00000428678 MRPS11P82912 194 aaKnown RBP15.69■□□□□ 0.1
UPK3BP1-201ENST00000428678 MFSD13AQ14CX5 517 aa15.69■□□□□ 0.1
UPK3BP1-201ENST00000428678 FXNQ16595 210 aa15.69■□□□□ 0.1
UPK3BP1-201ENST00000428678 ALKBH6Q3KRA9 238 aa15.69■□□□□ 0.1
UPK3BP1-201ENST00000428678 GLIPR1L2Q4G1C9 344 aa15.69■□□□□ 0.1
UPK3BP1-201ENST00000428678 C5orf46Q6UWT4 87 aa15.69■□□□□ 0.1
UPK3BP1-201ENST00000428678 C6orf89Q6UWU4 347 aa15.69■□□□□ 0.1
UPK3BP1-201ENST00000428678 C1orf229Q6ZS94 237 aaPredicted RBP15.69■□□□□ 0.1
UPK3BP1-201ENST00000428678 ZNF75AQ96N20 296 aa15.69■□□□□ 0.1
UPK3BP1-201ENST00000428678 TPT1P8Q9HAU6 139 aa15.69■□□□□ 0.1
UPK3BP1-201ENST00000428678 HAO1Q9UJM8 370 aa15.69■□□□□ 0.1
UPK3BP1-201ENST00000428678 ZNF346Q9UL40 294 aaKnown RBP15.69■□□□□ 0.1
UPK3BP1-201ENST00000428678 GPR45Q9Y5Y3 372 aa15.69■□□□□ 0.1
UPK3BP1-201ENST00000428678 TRRAPQ9Y4A5 3859 aa15.69■□□□□ 0.1
UPK3BP1-201ENST00000428678 TRAV36DV7A0A075B6V5 113 aa15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 LOC102725191A0A1B0GVB3 256 aa15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 SDHDO14521 159 aa15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 RP2O75695 350 aa15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 HPRP00739 348 aa15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 AVPP01185 164 aa15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 HLA-DOBP13765 273 aa15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 ANPEPP15144 967 aa15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 LSP1P33241 339 aa15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 LIMS1P48059 325 aa15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 ARFIP2P53365 341 aa15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 RAB1AP62820 205 aa15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 NKPD1Q17RQ9 610 aa15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 GTDC1Q4AE62 458 aa15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 ACSM5Q6NUN0 579 aa15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 NET1Q7Z628 596 aaPredicted RBP15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 GLB1L3Q8NCI6 653 aaPredicted RBP15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 ADPRHL1Q8NDY3 354 aa15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 OR6N1Q8NGY5 312 aa15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 SUCNR1Q9BXA5 334 aa15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 ULBP2Q9BZM5 246 aa15.68■□□□□ 0.1
UPK3BP1-201ENST00000428678 ZNF385DQ9H6B1 395 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms