RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 MMP17Q9ULZ9 603 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 TRAV18A0A075B6X5 111 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 TRAV17A0A0B4J275 112 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 SEC14L6B5MCN3 397 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 GPR75O95800 540 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 RD3LP0DJH9 198 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 PRSS12P56730 875 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 ERVK-25P63136 954 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 GPR18Q14330 331 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 HNF4GQ14541 408 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 TRIP6Q15654 476 aaKnown RBP5.31□□□□□ -1.56
HERC4-206ENST00000427635 ATP6AP1Q15904 470 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 UGT8Q16880 541 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 ACTBL2Q562R1 376 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 SIGIRRQ6IA17 410 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 ESPNLQ6ZVH7 1005 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 COMMD6Q7Z4G1 85 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 C1orf210Q8IVY1 113 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 SDR9C7Q8NEX9 313 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 CMASQ8NFW8 434 aaPredicted RBP5.31□□□□□ -1.56
HERC4-206ENST00000427635 TFAP2CQ92754 450 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 FBXO17Q96EF6 278 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 PRSS16Q9NQE7 514 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 PLSCR4Q9NRQ2 329 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 IL37Q9NZH6 218 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 YARS2Q9Y2Z4 477 aaKnown RBP5.31□□□□□ -1.56
HERC4-206ENST00000427635 HRH3Q9Y5N1 445 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 NPIPB15A6NHN6 443 aaPredicted RBP5.31□□□□□ -1.56
HERC4-206ENST00000427635 ITM2AO43736 263 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 PDGFAP04085 211 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 LIPFP07098 398 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 HLA-DOBP13765 273 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 FDXRP22570 491 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 PRSS3P35030 304 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 CSNK1DP48730 415 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 RAP2BP61225 183 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 GRB2P62993 217 aaKnown RBP5.31□□□□□ -1.56
HERC4-206ENST00000427635 ERHP84090 104 aaKnown RBP5.31□□□□□ -1.56
HERC4-206ENST00000427635 TNFRSF17Q02223 184 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 KEAP1Q14145 624 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 GK3PQ14409 553 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 LIPKQ5VXJ0 399 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 ASTLQ6HA08 431 aaPredicted RBP5.31□□□□□ -1.56
HERC4-206ENST00000427635 C1orf162Q8NEQ5 155 aaPredicted RBP5.31□□□□□ -1.56
HERC4-206ENST00000427635 TMIGD2Q96BF3 282 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 PDCD1LG2Q9BQ51 273 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 WWTR1Q9GZV5 400 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.31□□□□□ -1.561e-6■□□□□ 10.3
HERC4-206ENST00000427635 GPATCH2Q9NW75 528 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 USP36Q9P275 1121 aaKnown RBP5.31□□□□□ -1.56
HERC4-206ENST00000427635 CYB5R1Q9UHQ9 305 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 STUB1Q9UNE7 303 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 PPLO60437 1756 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 ADGRB1O14514 1584 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 TMEM269A0A1B0GVZ9 245 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 C20orf202A1L168 122 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 XKRY2A2RUG3 117 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 H3BSA7 217 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 CYR61O00622 381 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 MSTNO14793 375 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 XRCC2O43543 280 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 GLRA1P23415 457 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 PTH2RP49190 550 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 IDH3GP51553 393 aaPredicted RBP5.31□□□□□ -1.56
HERC4-206ENST00000427635 UBE2IP63279 158 aaKnown RBP5.31□□□□□ -1.56
HERC4-206ENST00000427635 MFAP5Q13361 173 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 ZNF626Q68DY1 528 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 PSAPL1Q6NUJ1 521 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 PLXDC2Q6UX71 529 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 MOB3BQ86TA1 216 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 SPEM1Q8N4L4 309 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 KDF1Q8NAX2 398 aaPredicted RBP5.31□□□□□ -1.56
HERC4-206ENST00000427635 BHLHE23Q8NDY6 225 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 ELMOD3Q96FG2 381 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 NMES1Q9C002 83 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 FOXQ1Q9C009 403 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 NARFLQ9H6Q4 476 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 MAGIXQ9H6Y5 334 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 LIN7BQ9HAP6 207 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 DHCR7Q9UBM7 475 aaKnown RBP5.31□□□□□ -1.56
HERC4-206ENST00000427635 FOXD3Q9UJU5 478 aaPredicted RBP5.31□□□□□ -1.56
HERC4-206ENST00000427635 HHLA2Q9UM44 414 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 POLDIP2Q9Y2S7 368 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 PCDHGA7Q9Y5G6 932 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 R4GN57 208 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 KIF13AQ9H1H9 1805 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 TRAV36DV7A0A075B6V5 113 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 TMED7-TICAM2A0A0A6YYA0 188 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 ATP6V1G2-DDX39BF2Z307 99 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 M0R233 179 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 AIPO00170 330 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 AQP7O14520 342 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 HSD17B6O14756 317 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 DSCR3O14972 297 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 OR7C1O76099 320 aaPredicted RBP5.31□□□□□ -1.56
HERC4-206ENST00000427635 CSF1P09603 554 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 GAAP10253 952 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 MGST1P10620 155 aaKnown RBP5.31□□□□□ -1.56
HERC4-206ENST00000427635 MPLP40238 635 aa5.31□□□□□ -1.56
HERC4-206ENST00000427635 IL24Q13007 206 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms