RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 SLC22A3O75751 556 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 FARS2O95363 451 aaKnown RBP10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 IDO1P14902 403 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 TCN1P20061 433 aaPredicted RBP10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 IL2RGP31785 369 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 PTDSS1P48651 473 aaKnown RBP10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 UFM1P61960 85 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 RAB1AP62820 205 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 PIGFQ07326 219 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 PMS2P3Q13401 168 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 TRIP10Q15642 601 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 CDK20Q8IZL9 346 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 OR1J2Q8NGS2 313 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 CLDND2Q8NHS1 167 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 NANPQ8TBE9 248 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 C11orf40Q8WZ69 217 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 TRIM44Q96DX7 344 aaPredicted RBP10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 SLC47A1Q96FL8 570 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 PAIP2Q9BPZ3 127 aaKnown RBP10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 NARFLQ9H6Q4 476 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 RNF121Q9H920 327 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 MEAF6Q9HAF1 191 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 TPT1P8Q9HAU6 139 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 TMEM27Q9HBJ8 222 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 LPAR2Q9HBW0 351 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 DECR2Q9NUI1 292 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 DDX28Q9NUL7 540 aaKnown RBP10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 SLCO1C1Q9NYB5 712 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 SLC7A8Q9UHI5 535 aa10.58□□□□□ -0.72
HLA-DQB3-203ENST00000425319 TMEM89A2RUT3 159 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 LYNX1G3V0Z9 82 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ITM2AO43736 263 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 NPIPB7O75200 414 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 VENTXO95231 258 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 PNPP00491 289 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 CELA3BP08861 270 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ZCCHC18P0CG32 403 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 LYNX1P0DP58 116 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 GAAP10253 952 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 DRD4P21917 467 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 AHCYP23526 432 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 RAD52P43351 418 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 COMPP49747 757 aaPredicted RBP10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 P2RY4P51582 365 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 PLP2Q04941 152 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 PCGF3Q3KNV8 242 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 FAM209AQ5JX71 171 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 C6orf10Q5SRN2 563 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 HHATQ5VTY9 493 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 CARD17Q5XLA6 110 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 RGS7BPQ6MZT1 257 aaPredicted RBP10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ULK3Q6PHR2 472 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 THSD4Q6ZMP0 1018 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 PIWIL3Q7Z3Z3 882 aaKnown RBP10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 DPPA2Q7Z7J5 298 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 CROCCP2Q86T23 111 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 PEG10Q86TG7 708 aaKnown RBP10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 CLIP4Q8N3C7 705 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 BPIFB2Q8N4F0 458 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 CPEB3Q8NE35 698 aaKnown RBP10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 BHLHE22Q8NFJ8 381 aaPredicted RBP10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 OR6S1Q8NH40 331 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 BBS10Q8TAM1 723 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 SLC38A5Q8WUX1 472 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 RAB1CQ92928 201 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ULBP2Q9BZM5 246 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 KCNN2Q9H2S1 579 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 C1orf198Q9H425 327 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 EVA1AQ9H8M9 152 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 NTN4Q9HB63 628 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 AIG1Q9NVV5 245 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 TREM2Q9NZC2 230 aa10.57□□□□□ -0.72
HLA-DQB3-203ENST00000425319 A0A0G2JMP0 313 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 A0A0X1KG70 313 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 PRORSD1PA6NEY8 169 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 J3QLI3 93 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 M0R082 166 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 TYROBPO43914 113 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 HLA-HP01893 362 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ETFAP13804 333 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 EPHA1P21709 976 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 GATA3P23771 443 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 COL8A2P25067 703 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 GRPRP30550 384 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ETV4P43268 484 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 KRT71Q3SY84 523 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ALG10BQ5I7T1 473 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 COX20Q5RI15 118 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 TMEM53Q6P2H8 277 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 MSANTD1Q6ZTZ1 278 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 LINGO2Q7L985 606 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 SERPINA11Q86U17 422 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 RETREG3Q86VR2 466 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 C20orf196Q8IYI0 205 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 MIER2Q8N344 545 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 SCAIQ8N9R8 606 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ADPRHL1Q8NDY3 354 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 OR4M2Q8NGB6 313 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 ZNF417Q8TAU3 575 aa10.56□□□□□ -0.72
HLA-DQB3-203ENST00000425319 KTI12Q96EK9 354 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms