RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 ZNF337Q9Y3M9 751 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 NPFFR2Q9Y5X5 522 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 H3BSH0 61 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 TSC22D2O75157 780 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 TRIM3O75382 744 aaPredicted RBP9.72□□□□□ -0.85
CUX1-205ENST00000425244 PPM1BO75688 479 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 OR7A10O76100 309 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 SYPP08247 313 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 PSMD4P55036 377 aaKnown RBP9.72□□□□□ -0.85
CUX1-205ENST00000425244 CCL7P80098 99 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 CD226Q15762 336 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 SLC23A3Q6PIS1 610 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 POMZP3Q6PJE2 187 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 MED25Q71SY5 747 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 JAZF1Q86VZ6 243 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 SYS1Q8N2H4 156 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 OR51Q1Q8NH59 317 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 OR14A16Q8NHC5 309 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 DEDD2Q8WXF8 326 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 HSD17B8Q92506 261 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 BEX1Q9HBH7 125 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 MRPL15Q9P015 296 aaKnown RBP9.72□□□□□ -0.85
CUX1-205ENST00000425244 DHCR7Q9UBM7 475 aaKnown RBP9.72□□□□□ -0.85
CUX1-205ENST00000425244 ZNF222Q9UK12 451 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 NOSIPQ9Y314 301 aaKnown RBP9.72□□□□□ -0.85
CUX1-205ENST00000425244 TMEM184BQ9Y519 407 aaPredicted RBP9.72□□□□□ -0.85
CUX1-205ENST00000425244 MPDZO75970 2070 aa9.72□□□□□ -0.85
CUX1-205ENST00000425244 A0A087WV48 116 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 C17orf105B2RV13 164 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 H7C1C5 153 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 OGG1O15527 345 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 C1QBP02746 253 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 MT-ND4P03905 459 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 F13BP05160 661 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 FOLR1P15328 257 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 BTCP35070 178 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 GRK6P43250 576 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 CAPZA2P47755 286 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 CCR6P51684 374 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 EPHA4P54764 986 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 RPS11P62280 158 aaKnown RBP eCLIP9.71□□□□□ -0.856e-6■■■■■ 44.3
CUX1-205ENST00000425244 LCN6P62502 163 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 TIGD3Q6B0B8 471 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 RPL22L1Q6P5R6 122 aaKnown RBP9.71□□□□□ -0.85
CUX1-205ENST00000425244 CBLN3Q6UW01 205 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 IDO2Q6ZQW0 420 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 TTLL10Q6ZVT0 673 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 KANSL1Q7Z3B3 1105 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 PRR22Q8IZ63 422 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 ZNF321PQ8N8H1 164 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 GCDHQ92947 438 aaPredicted RBP9.71□□□□□ -0.85
CUX1-205ENST00000425244 OR8D2Q9GZM6 311 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 DPAGT1Q9H3H5 408 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 EVA1AQ9H8M9 152 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 NRIP3Q9NQ35 241 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 CLDN16Q9Y5I7 305 aa9.71□□□□□ -0.85
CUX1-205ENST00000425244 IGKV1D-42A0A075B6H8 117 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 TRAV1-2A0A0B4J238 106 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 LY6G6EA0A0G2JKS1 128 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 A0A1W2PQM1 296 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 LNP1A1A4G5 178 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 KHNYNO15037 678 aaKnown RBP9.71□□□□□ -0.86
CUX1-205ENST00000425244 SRPX2O60687 465 aaPredicted RBP9.71□□□□□ -0.86
CUX1-205ENST00000425244 ZNF254O75437 659 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 OR2B3O76000 313 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 UBL3O95164 117 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 DHFRP00374 187 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 IFI6P09912 130 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 CLDN12P56749 244 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 GPLD1P80108 840 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 HSD11B2P80365 405 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 SLC36A2Q495M3 483 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 CCDC28AQ8IWP9 274 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 OR6C4Q8NGE1 309 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 IFI44Q8TCB0 444 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 YIPF5Q969M3 257 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 PMEPA1Q969W9 287 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 MOGAT1Q96PD6 335 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 GAL3ST4Q96RP7 486 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 ALG12Q9BV10 488 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 AUNIPQ9H7T9 357 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 RXFP3Q9NSD7 469 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 NKIRAS2Q9NYR9 191 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 ICAM5Q9UMF0 924 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 PLCL2Q9UPR0 1127 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 U3KQA8 63 aa9.71□□□□□ -0.86
CUX1-205ENST00000425244 ARPC4-TTLL3A0A0A6YYG9 625 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 PRR32B1ATL7 298 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 NSA2O95478 260 aaKnown RBP9.7□□□□□ -0.86
CUX1-205ENST00000425244 ADRB1P08588 477 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 UCHL1P09936 223 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 OR8G3PP0DMU2 310 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 PTGS2P35354 604 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 CDKN2AP42771 156 aaKnown RBP9.7□□□□□ -0.86
CUX1-205ENST00000425244 ZNF574Q6ZN55 896 aaPredicted RBP9.7□□□□□ -0.86
CUX1-205ENST00000425244 LINGO2Q7L985 606 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 SERPINA12Q8IW75 414 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 CMIPQ8IY22 773 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 TIGD4Q8IY51 512 aa9.7□□□□□ -0.86
CUX1-205ENST00000425244 SLC43A2Q8N370 569 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms