RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 RNF121Q9H920 327 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 GPR27Q9NS67 375 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 MED17Q9NVC6 651 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 OCIAD1Q9NX40 245 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 KLK11Q9UBX7 282 aa10.82□□□□□ -0.68
PTPRN-204ENST00000423636 AK1P00568 194 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 SFTPDP35247 375 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 THBS2P35442 1172 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 TALDO1P37837 337 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 PRSS12P56730 875 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 KRR1Q13601 381 aaKnown RBP10.81□□□□□ -0.68
PTPRN-204ENST00000423636 GPR176Q14439 515 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 Q5BKY6 102 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 ATG4DQ86TL0 474 aaPredicted RBP10.81□□□□□ -0.68
PTPRN-204ENST00000423636 GPAT4Q86UL3 456 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 ZNF687Q8N1G0 1237 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 C1orf216Q8TAB5 229 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 RGP1Q92546 391 aaPredicted RBP10.81□□□□□ -0.68
PTPRN-204ENST00000423636 ADIPOR1Q96A54 375 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 TXNDC15Q96J42 360 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 ZNF426Q9BUY5 554 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 PRDM9Q9NQV7 894 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 RXFP3Q9NSD7 469 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 COPS7AQ9UBW8 275 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 PRODH2Q9UF12 536 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 SIT1Q9Y3P8 196 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 A0A1W2PQM1 296 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 IRGMA1A4Y4 181 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 SIGLEC6O43699 453 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 RPS11P62280 158 aaKnown RBP eCLIP10.81□□□□□ -0.68
PTPRN-204ENST00000423636 OR7A5Q15622 319 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 WBP2NLQ6ICG8 309 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 METTL21AQ8WXB1 218 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 JSRP1Q96MG2 331 aaPredicted RBP10.81□□□□□ -0.68
PTPRN-204ENST00000423636 WWTR1Q9GZV5 400 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 NRIP3Q9NQ35 241 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 SUSD2Q9UGT4 822 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 LAMP5Q9UJQ1 280 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 CEP192Q8TEP8 1941 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 A0A0G2JK05 382 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 LOC101059948A0A1B0GTJ6 334 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 A0A1W2PNR3 127 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 SKP1P63208 163 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 COL28A1Q2UY09 1125 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 TCTE1Q5JU00 501 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 OR10K2Q6IF99 312 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 TCEAL6Q6IPX3 200 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 PLXDC1Q8IUK5 500 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 UXS1Q8NBZ7 420 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 ZNF417Q8TAU3 575 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 TCEAL3Q969E4 200 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 NKD1Q969G9 470 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 ZNF486Q96H40 463 aaPredicted RBP10.81□□□□□ -0.68
PTPRN-204ENST00000423636 ZNF587Q96SQ5 575 aaPredicted RBP10.81□□□□□ -0.68
PTPRN-204ENST00000423636 CDX2Q99626 313 aaPredicted RBP10.81□□□□□ -0.68
PTPRN-204ENST00000423636 C14orf105Q9NVL8 296 aa10.81□□□□□ -0.68
PTPRN-204ENST00000423636 SMG1Q96Q15 3661 aaKnown RBP10.8□□□□□ -0.68
PTPRN-204ENST00000423636 TRAV8-7A0A075B6U6 113 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 SUSD5O60279 629 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 LMX1BO60663 402 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 FOSL2P15408 326 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 PPICP45877 212 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 DIO1P49895 249 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 CDK5R1Q15078 307 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 GFOD2Q3B7J2 385 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 HSD17B12Q53GQ0 312 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 LINC00114Q6XXX2 140 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 ZNF676Q8N7Q3 588 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 ZNF527Q8NB42 609 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 CENPMQ9NSP4 180 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 SLCO1C1Q9NYB5 712 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 MRM2Q9UI43 246 aaKnown RBP10.8□□□□□ -0.68
PTPRN-204ENST00000423636 FBXL3Q9UKT7 428 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 IGKV1D-43A0A0B4J1Z2 117 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 IGLV3-19P01714 112 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 HEXBP07686 556 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 SHBQ15464 509 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 ACKR1Q16570 336 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 TMEM255AQ5JRV8 349 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 LINC01590Q5TEZ4 76 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 DMKNQ6E0U4 476 aaPredicted RBP10.8□□□□□ -0.68
PTPRN-204ENST00000423636 TMEM53Q6P2H8 277 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 SLC29A4Q7RTT9 530 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 TMPRSS12Q86WS5 348 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 MINDY2Q8NBR6 621 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 PLPP7Q8NBV4 271 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 RNF170Q96K19 258 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 GFI1Q99684 422 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 TMEM246Q9BRR3 403 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 FRRS1LQ9P0K9 344 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 ZNF222Q9UK12 451 aa10.8□□□□□ -0.68
PTPRN-204ENST00000423636 TRBV11-1A0A0K0K1C0 115 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 FLRT2O43155 660 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 PLPP2O43688 288 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 SCRG1O75711 98 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 OR6A2O95222 327 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 CD14P08571 375 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 SLC2A1P11166 492 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 CTLA4P16410 223 aa10.79□□□□□ -0.68
PTPRN-204ENST00000423636 MZT2AQ6P582 158 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms