RNA–Protein interactions for RNA: ENST00000423058.6

SCN1A-204, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN1A, Length 8,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-204ENST00000423058 THAP7Q9BT49 309 aaPredicted RBP6.37□□□□□ -1.39
SCN1A-204ENST00000423058 A0A1B0GUL6 1792 aa6.37□□□□□ -1.39
SCN1A-204ENST00000423058 TRAV36DV7A0A075B6V5 113 aa6.37□□□□□ -1.39
SCN1A-204ENST00000423058 ZNF593O00488 134 aaPredicted RBP6.37□□□□□ -1.39
SCN1A-204ENST00000423058 YIF1AO95070 293 aa6.37□□□□□ -1.39
SCN1A-204ENST00000423058 F7P08709 466 aaPredicted RBP6.37□□□□□ -1.39
SCN1A-204ENST00000423058 BLVRBP30043 206 aaPredicted RBP6.37□□□□□ -1.39
SCN1A-204ENST00000423058 TRHRP34981 398 aaPredicted RBP6.37□□□□□ -1.39
SCN1A-204ENST00000423058 HTR2BP41595 481 aa6.37□□□□□ -1.39
SCN1A-204ENST00000423058 GABREP78334 506 aa6.37□□□□□ -1.39
SCN1A-204ENST00000423058 MOGSQ13724 837 aa6.37□□□□□ -1.39
SCN1A-204ENST00000423058 P2RY14Q15391 338 aa6.37□□□□□ -1.39
SCN1A-204ENST00000423058 BAGE3Q86Y29 109 aa6.37□□□□□ -1.39
SCN1A-204ENST00000423058 BAGE2Q86Y30 109 aa6.37□□□□□ -1.39
SCN1A-204ENST00000423058 EGFL6Q8IUX8 553 aa6.37□□□□□ -1.39
SCN1A-204ENST00000423058 CPNE4Q96A23 557 aaPredicted RBP6.37□□□□□ -1.39
SCN1A-204ENST00000423058 SARAFQ96BY9 339 aa6.37□□□□□ -1.39
SCN1A-204ENST00000423058 SIGLEC10Q96LC7 697 aa6.37□□□□□ -1.39
SCN1A-204ENST00000423058 TOX2Q96NM4 488 aa6.37□□□□□ -1.39
SCN1A-204ENST00000423058 NUDT22Q9BRQ3 303 aa6.37□□□□□ -1.39
SCN1A-204ENST00000423058 SLCO5A1Q9H2Y9 848 aa6.37□□□□□ -1.39
SCN1A-204ENST00000423058 SPACA1Q9HBV2 294 aa6.37□□□□□ -1.39
SCN1A-204ENST00000423058 NOX3Q9HBY0 568 aa6.37□□□□□ -1.39
SCN1A-204ENST00000423058 HCFC1R1Q9NWW0 138 aa6.37□□□□□ -1.39
SCN1A-204ENST00000423058 NUMBLQ9Y6R0 609 aa6.37□□□□□ -1.39
SCN1A-204ENST00000423058 LRRC3CA6NJW4 275 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 TXNL1O43396 289 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 SORBS2O94875 1100 aaKnown RBP6.36□□□□□ -1.39
SCN1A-204ENST00000423058 UTS2O95399 124 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 RPL7P18124 248 aaKnown RBP6.36□□□□□ -1.39
SCN1A-204ENST00000423058 HNF1AP20823 631 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 DRD5P21918 477 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 UBE2KP61086 200 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 MC2RQ01718 297 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 ZNF791Q3KP31 576 aaPredicted RBP6.36□□□□□ -1.39
SCN1A-204ENST00000423058 PRAMEF20Q5VT98 475 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 COX15Q7KZN9 410 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 DPPA2Q7Z7J5 298 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 TMEM135Q86UB9 458 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 CLECL1Q8IZS7 167 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 LIPHQ8WWY8 451 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 GIMAP2Q9UG22 337 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 PRDM4Q9UKN5 801 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 PIGLQ9Y2B2 252 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 ETV7Q9Y603 341 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 WNT7AO00755 349 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 HOXB5P09067 269 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 C4BP0C0L5 1744 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 ARAFP10398 606 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 FGF3P11487 239 aaPredicted RBP6.36□□□□□ -1.39
SCN1A-204ENST00000423058 OR1D4P47884 311 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 TGM4P49221 684 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 BIDP55957 195 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 MAP4K2Q12851 820 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 EDDM3AQ14507 147 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 EXOSC7Q15024 291 aaKnown RBP6.36□□□□□ -1.39
SCN1A-204ENST00000423058 RBMS2Q15434 407 aaKnown RBP6.36□□□□□ -1.39
SCN1A-204ENST00000423058 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.36□□□□□ -1.39
SCN1A-204ENST00000423058 GLYR1Q49A26 553 aaPredicted RBP6.36□□□□□ -1.39
SCN1A-204ENST00000423058 CPZQ66K79 652 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 OR2A2Q6IF42 318 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 C6orf89Q6UWU4 347 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 SVBPQ8N300 66 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 SLC22A24Q8N4F4 322 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 CYB561A3Q8NBI2 242 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 PLPP5Q8NEB5 264 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 HPSE2Q8WWQ2 592 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 MRPL38Q96DV4 380 aaKnown RBP6.36□□□□□ -1.39
SCN1A-204ENST00000423058 INPP5KQ9BT40 448 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 CHRDL1Q9BU40 450 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 MFFQ9GZY8 342 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 HES4Q9HCC6 221 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 MCM3APO60318 1980 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 PRAMEF25A6NGN4 478 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 H0YGG7 62 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 SLC31A2O15432 143 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 LYRM1O43325 122 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 OIP5O43482 229 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 RAD1O60671 282 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 CYBAP13498 195 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 WDR4P57081 412 aaKnown RBP6.36□□□□□ -1.39
SCN1A-204ENST00000423058 FGFBP1Q14512 234 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 MRPL2Q5T653 305 aaKnown RBP6.36□□□□□ -1.39
SCN1A-204ENST00000423058 RPL22L1Q6P5R6 122 aaKnown RBP6.36□□□□□ -1.39
SCN1A-204ENST00000423058 PODNL1Q6PEZ8 512 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 ZNF546Q86UE3 836 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 GIMAP1Q8WWP7 306 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 LINC00597Q9H2U6 94 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 MED17Q9NVC6 651 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 TAS2R16Q9NYV7 291 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 MAST2Q6P0Q8 1798 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 COL2A1P02458 1487 aaPredicted RBP6.36□□□□□ -1.39
SCN1A-204ENST00000423058 FOLR1P15328 257 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 MYF6P23409 242 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 DLX5P56178 289 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 PHYHD1Q5SRE7 291 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 Q6ZTK2 550 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 NAGSQ8N159 534 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 BPIFCQ8NFQ6 507 aa6.36□□□□□ -1.39
SCN1A-204ENST00000423058 OR10AD1Q8NGE0 317 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms