RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 RTP5Q14D33 572 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 INAQ16352 499 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 ACKR1Q16570 336 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 MS4A18Q3C1V0 323 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 C3orf33Q6P1S2 294 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 GDPGP1Q6ZNW5 385 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 PHC2Q8IXK0 858 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 GTPBP8Q8N3Z3 284 aaPredicted RBP18.86■□□□□ 0.61
GPC1-202ENST00000420138 OR1J4Q8NGS1 313 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 OR52N1Q8NH53 320 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 ZNF519Q8TB69 540 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 IP6K3Q96PC2 410 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 TSSK2Q96PF2 358 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 NDEL1Q9GZM8 345 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 NXF2Q9GZY0 626 aaKnown RBP18.86■□□□□ 0.61
GPC1-202ENST00000420138 ISYNA1Q9NPH2 558 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 STMN3Q9NZ72 180 aa18.86■□□□□ 0.61
GPC1-202ENST00000420138 DCTN6O00399 190 aa18.85■□□□□ 0.61
GPC1-202ENST00000420138 RNF13O43567 381 aa18.85■□□□□ 0.61
GPC1-202ENST00000420138 IGHMP01871 453 aa18.85■□□□□ 0.61
GPC1-202ENST00000420138 DPP4P27487 766 aa18.85■□□□□ 0.61
GPC1-202ENST00000420138 DNASE1L1P49184 302 aa18.85■□□□□ 0.61
GPC1-202ENST00000420138 DSCR4P56555 118 aaPredicted RBP18.85■□□□□ 0.61
GPC1-202ENST00000420138 ZP4Q12836 540 aa18.85■□□□□ 0.61
GPC1-202ENST00000420138 MYBPHQ13203 477 aa18.85■□□□□ 0.61
GPC1-202ENST00000420138 MFSD13AQ14CX5 517 aa18.85■□□□□ 0.61
GPC1-202ENST00000420138 GLYR1Q49A26 553 aaPredicted RBP18.85■□□□□ 0.61
GPC1-202ENST00000420138 SLC35D3Q5M8T2 416 aa18.85■□□□□ 0.61
GPC1-202ENST00000420138 ZNF322Q6U7Q0 402 aaPredicted RBP18.85■□□□□ 0.61
GPC1-202ENST00000420138 JAZF1Q86VZ6 243 aa18.85■□□□□ 0.61
GPC1-202ENST00000420138 GPALPP1Q8IXQ4 340 aa18.85■□□□□ 0.61
GPC1-202ENST00000420138 ARIH2OSQ8N7S6 290 aa18.85■□□□□ 0.61
GPC1-202ENST00000420138 SCAIQ8N9R8 606 aa18.85■□□□□ 0.61
GPC1-202ENST00000420138 SMPDL3BQ92485 455 aa18.85■□□□□ 0.61
GPC1-202ENST00000420138 RPRD1BQ9NQG5 326 aaKnown RBP18.85■□□□□ 0.61
GPC1-202ENST00000420138 SERINC1Q9NRX5 453 aa18.85■□□□□ 0.61
GPC1-202ENST00000420138 NDUFB11Q9NX14 153 aa18.85■□□□□ 0.61
GPC1-202ENST00000420138 FAM47E-STBD1D6RA91 191 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 H7C1C5 153 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 GPX5O75715 221 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 PLGP00747 810 aaPredicted RBP18.84■□□□□ 0.61
GPC1-202ENST00000420138 TFPIP10646 304 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 HLA-DOBP13765 273 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 CPEP16870 476 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 AHCYP23526 432 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 CYB561P49447 251 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 RPS3AP61247 264 aaKnown RBP18.84■□□□□ 0.61
GPC1-202ENST00000420138 LCN6P62502 163 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 ZNF85Q03923 595 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 PON3Q15166 354 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 ATP1A1-AS1Q5TC04 95 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 KDM8Q8N371 416 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 KLHL36Q8N4N3 616 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 OR10H4Q8NGA5 316 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 SPRYD4Q8WW59 207 aaPredicted RBP18.84■□□□□ 0.61
GPC1-202ENST00000420138 TBX5Q99593 518 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 TXNIPQ9H3M7 391 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 TMEM185BQ9H7F4 350 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 ISG20L2Q9H9L3 353 aaKnown RBP18.84■□□□□ 0.61
GPC1-202ENST00000420138 DEPPQ9NTK1 212 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 OPN1LWP04000 364 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 P04436 131 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 PSMA1P25786 263 aaKnown RBP18.84■□□□□ 0.61
GPC1-202ENST00000420138 ACSM1Q08AH1 577 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 POU4F2Q12837 409 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 AIMP2Q13155 320 aaKnown RBP18.84■□□□□ 0.61
GPC1-202ENST00000420138 SELENBP1Q13228 472 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 TPBGQ13641 420 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 GALEQ14376 348 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 LIPKQ5VXJ0 399 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 LYPD4Q6UWN0 246 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 H1FNTQ75WM6 255 aaPredicted RBP18.84■□□□□ 0.61
GPC1-202ENST00000420138 CDADC1Q9BWV3 514 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 INPP5EQ9NRR6 644 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 SACM1LQ9NTJ5 587 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 ALKBH4Q9NXW9 302 aa18.84■□□□□ 0.61
GPC1-202ENST00000420138 RPH3AQ9Y2J0 694 aaPredicted RBP18.84■□□□□ 0.61
GPC1-202ENST00000420138 CAB39Q9Y376 341 aaPredicted RBP18.84■□□□□ 0.61
GPC1-202ENST00000420138 SPIN1Q9Y657 262 aaPredicted RBP18.84■□□□□ 0.61
GPC1-202ENST00000420138 LRRC3CA6NJW4 275 aa18.83■□□□□ 0.6
GPC1-202ENST00000420138 CBR3O75828 277 aa18.83■□□□□ 0.6
GPC1-202ENST00000420138 GLCEO94923 617 aa18.83■□□□□ 0.6
GPC1-202ENST00000420138 CD96P40200 585 aa18.83■□□□□ 0.6
GPC1-202ENST00000420138 CRYBB2P43320 205 aa18.83■□□□□ 0.6
GPC1-202ENST00000420138 RPL27P61353 136 aaKnown RBP18.83■□□□□ 0.6
GPC1-202ENST00000420138 LGALS3BPQ08380 585 aa18.83■□□□□ 0.6
GPC1-202ENST00000420138 PUDPQ08623 228 aa18.83■□□□□ 0.6
GPC1-202ENST00000420138 BTLAQ7Z6A9 289 aa18.83■□□□□ 0.6
GPC1-202ENST00000420138 OR6V1Q8N148 313 aa18.83■□□□□ 0.6
GPC1-202ENST00000420138 RFLNBQ8N5W9 214 aa18.83■□□□□ 0.6
GPC1-202ENST00000420138 NXPE2Q96DL1 559 aa18.83■□□□□ 0.6
GPC1-202ENST00000420138 TRMT61AQ96FX7 289 aaKnown RBP18.83■□□□□ 0.6
GPC1-202ENST00000420138 JSRP1Q96MG2 331 aaPredicted RBP18.83■□□□□ 0.6
GPC1-202ENST00000420138 ALG8Q9BVK2 526 aa18.83■□□□□ 0.6
GPC1-202ENST00000420138 CHST11Q9NPF2 352 aa18.83■□□□□ 0.6
GPC1-202ENST00000420138 FANCFQ9NPI8 374 aa18.83■□□□□ 0.6
GPC1-202ENST00000420138 STUB1Q9UNE7 303 aa18.83■□□□□ 0.6
GPC1-202ENST00000420138 SF3B6Q9Y3B4 125 aaKnown RBP18.83■□□□□ 0.6
GPC1-202ENST00000420138 DOCK10Q96BY6 2186 aa18.82■□□□□ 0.6
GPC1-202ENST00000420138 A0A1W2PQL4 384 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms