RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 F2RL1P55085 397 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 SCAND1P57086 179 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 NAAAQ02083 359 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 GUCA2AQ02747 115 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 PLA2G7Q13093 441 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 GAS6Q14393 721 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 MST1LQ2TV78 715 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 DEFB115Q30KQ5 88 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 TMED4Q7Z7H5 227 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 OR2L13Q8N349 312 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 TFGQ92734 400 aaPredicted RBP7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 GLYATL1Q969I3 302 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 MOAP1Q96BY2 351 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 ARMC5Q96C12 935 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 ZMYND19Q96E35 227 aaPredicted RBP7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 CNN2Q99439 309 aaKnown RBP7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC25A21Q9BQT8 299 aaPredicted RBP7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 GGACTQ9BVM4 153 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 MEPEQ9NQ76 525 aaPredicted RBP7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 ADAM29Q9UKF5 820 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 ICAM5Q9UMF0 924 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNF443Q9Y2A4 671 aaPredicted RBP7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 FAM96BQ9Y3D0 163 aa7.34□□□□□ -1.24
HMGXB4-202ENST00000418170 OBSL1O75147 1896 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 NPIPB9F8W1W9 429 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 TNRC18O15417 2968 aaPredicted RBP7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 NDUFS4O43181 175 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 FAM157CP0CG43 387 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 RD3LP0DJH9 198 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 CD34P28906 385 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 HTR5AP47898 357 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 TRA2BP62995 288 aaKnown RBP7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 HTRA4P83105 476 aaPredicted RBP7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 HGFACQ04756 655 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 DHRS2Q13268 280 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 YOD1Q5VVQ6 348 aaPredicted RBP7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 C22orf39Q6P5X5 142 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 DRAM2Q6UX65 266 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 TMPRSS11FQ6ZWK6 438 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 UBE3DQ7Z6J8 389 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 BAP18Q8IXM2 172 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 OR1J2Q8NGS2 313 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 TMEM239Q8WW34 195 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 CPNE2Q96FN4 548 aaPredicted RBP7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 SEC22AQ96IW7 307 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 CLEC4EQ9ULY5 219 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 MYADML2A6NDP7 307 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 RHPN2P1A8MT19 583 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 ZFPL1O95159 310 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 RPN2P04844 631 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 HOXC4P09017 264 aaPredicted RBP7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 HLA-GP17693 338 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 SSBP1Q04837 148 aaKnown RBP7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 GGTLC2Q14390 218 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 AMZ1Q400G9 498 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 KLHL26Q53HC5 615 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 RTP2Q5QGT7 225 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 ANKRD16Q6P6B7 361 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC35F2Q8IXU6 374 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 PAQR4Q8N4S7 273 aaPredicted RBP7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 DVL3Q92997 716 aaPredicted RBP7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 OTUB2Q96DC9 234 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 LAT2Q9GZY6 243 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 SLITRK2Q9H156 845 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 KLHL31Q9H511 634 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 OPA3Q9H6K4 179 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 RHOFQ9HBH0 211 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 PCDHGA1Q9Y5H4 931 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 A0A0A6YYD5 115 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 GLOD5A6NK44 160 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 CD14P08571 375 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 SFTA3P0C7M3 94 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 CSRP1P21291 193 aaKnown RBP7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 CD70P32970 193 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 NAA10P41227 235 aaPredicted RBP7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 CAV2P51636 162 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 PRKXP51817 358 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 RAB2AP61019 212 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 POLR2LP62875 67 aaKnown RBP7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 OR7A5Q15622 319 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 FAM110CQ1W6H9 321 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 TMEM244Q5VVB8 128 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC29A4Q7RTT9 530 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 OR10R2Q8NGX6 335 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 OR8S1Q8NH09 359 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 BPIFA2Q96DR5 249 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 IL17FQ96PD4 163 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 AIF1LQ9BQI0 150 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 POTEKPQ9BYX7 375 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 ZDHHC5Q9C0B5 715 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 NUP210LQ5VU65 1888 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 ATG2AQ2TAZ0 1938 aa7.33□□□□□ -1.24
HMGXB4-202ENST00000418170 TSPAN11A1L157 253 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 CPED1A4D0V7 1026 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 MEIS3P1A6NDR6 274 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 IDSB3KWA1 339 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 AP4M1O00189 453 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 CCSO14618 274 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 EMC8O43402 210 aa7.32□□□□□ -1.24
HMGXB4-202ENST00000418170 ERAL1O75616 437 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 228.1 ms